Novilysobacter ciconiae: INQ41_01905
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Entry
INQ41_01905 CDS
T08092
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
lcic
Novilysobacter ciconiae
Pathway
lcic03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lcic00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
INQ41_01905 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcic03019
]
INQ41_01905 (groL)
03110 Chaperones and folding catalysts [BR:
lcic03110
]
INQ41_01905 (groL)
03029 Mitochondrial biogenesis [BR:
lcic03029
]
INQ41_01905 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lcic04147
]
INQ41_01905 (groL)
Enzymes [BR:
lcic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
INQ41_01905 (groL)
Messenger RNA biogenesis [BR:
lcic03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
INQ41_01905 (groL)
Chaperones and folding catalysts [BR:
lcic03110
]
Heat shock proteins
HSP60 / Chaperonin
INQ41_01905 (groL)
Mitochondrial biogenesis [BR:
lcic03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
INQ41_01905 (groL)
Exosome [BR:
lcic04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
INQ41_01905 (groL)
Exosomal proteins of other body fluids (saliva and urine)
INQ41_01905 (groL)
Exosomal proteins of breast cancer cells
INQ41_01905 (groL)
Exosomal proteins of colorectal cancer cells
INQ41_01905 (groL)
Exosomal proteins of bladder cancer cells
INQ41_01905 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
QOW19848
UniProt:
A0A7S6ZSH2
LinkDB
All DBs
Position
420522..422171
Genome browser
AA seq
549 aa
AA seq
DB search
MAAKEIRFGEDARSKMLRGVNTLANAVKATLGPKGRNVVLDKSYGAPTITKDGVSVAKEI
ELADKFENMGAQMVKEVASRTSDDAGDGTTTATVLAQAFIREGMKAVAAGMNPMDLKRGI
DKAVTGAVAELKNISKPSSSSKEIAQVGTISANSDANIGDLIAKAMDKVGKEGVITVEDG
SGLDNELDVVEGMQFDRGYLSPYFINNQQSMQAELDDPFILLYDKKISNVRDLLPILEGV
AKAGKPLLIVAEDVEGEALATLVVNTIRGIVKVCAVKAPGFGDRRKAMLEDMAVLTGGTV
ISEEVGLALDKATIEDLGRAKKVQVSKENTTVIDGAGETGGIEGRIKQIKAQIEETSSDY
DREKLQERVAKLAGGVAVIKVGASTEIEMKEKKARVEDALHATRAAVEEGVVPGGGVALI
RALAAIVDLKGDNEDQNHGITIALRAMEAPLREIVINAGEEASVILNKVREGTGSYGYNA
ANGQYGDMLEFGILDPTKVTRTALQNAASIAGLMITTEAMVGELPKKDEPAMQGGGDMGG
MGGMGGMGF
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggctgccaaggaaattcgtttcggcgaagacgcgcgctccaagatgctgcgcggtgtc
aacacgctcgccaatgctgtcaaggcgactctcggcccgaagggtcgcaacgttgtgctc
gacaagagctacggcgcccccacgatcaccaaggacggcgtgtccgtcgccaaggagatc
gagctggccgacaagttcgagaacatgggcgcgcagatggtcaaggaagtcgcctcgcgc
acttccgatgacgccggcgacggcaccaccaccgcgaccgtgctggcccaggcgttcatt
cgcgagggcatgaaggccgttgccgccggcatgaacccgatggacctgaagcgcggcatc
gacaaggccgtcaccggcgctgtcgccgagctgaagaacatctccaagccgtcctccagc
agcaaggaaatcgcccaggtcggtacgatctcggccaactccgatgccaacatcggtgac
ctcatcgccaaggcgatggacaaggtcggcaaggaaggcgtgatcaccgtggaagacggc
tcgggcctggacaacgagctggacgtggtcgagggcatgcagttcgaccgcggctacctc
tccccgtacttcatcaacaaccagcagtcgatgcaggccgagctggatgacccgttcatc
ctgctgtacgacaagaagatctccaacgtccgcgacctgctgccgatcctggaaggcgtg
gccaaggccggcaagccgctgctgatcgtcgccgaagacgtcgagggcgaggccctggcg
accctggttgtcaacaccatccgcggcatcgtcaaggtctgcgccgtcaaggccccgggc
ttcggcgaccgtcgcaaggcgatgctggaagacatggccgtgctgaccggtggcaccgtg
atctccgaggaagtcggcctggcgctggacaaggcgaccatcgaagacctcggccgggcc
aagaaggtccaggtctccaaggaaaacaccaccgtcatcgacggcgccggcgagaccggt
ggcatcgaaggccgcatcaagcagatcaaggcgcagatcgaagagacctcttcggactac
gaccgcgagaagctgcaggagcgcgtggccaagctggccggcggcgttgcggtgatcaag
gtcggtgcctcgaccgagatcgagatgaaggaaaagaaggcccgcgttgaagacgccctg
cacgcgacccgcgcggcagtggaagaaggcgtggtcccgggcggcggcgtcgccctgatc
cgtgcgctggccgccattgtcgacctgaagggcgacaacgaagaccagaaccacggcatc
accatcgccctgcgcgcgatggaggccccgctgcgcgagatcgtgatcaacgccggtgaa
gaggcctcggtgatcctgaacaaggttcgcgaaggcaccggcagctacggttacaacgcg
gccaatggccagtacggcgacatgctcgagttcggcatcctggacccgaccaaggtgacc
cgcactgcgctgcagaacgcggcctccattgccggcctgatgatcaccaccgaagcgatg
gtgggcgagctgccgaagaaggacgagcctgccatgcagggcggcggcgacatgggcggc
atgggtggcatgggcggcatgggcttctaa
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