Novilysobacter ciconiae: INQ41_02245
Help
Entry
INQ41_02245 CDS
T08092
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
lcic
Novilysobacter ciconiae
Pathway
lcic00260
Glycine, serine and threonine metabolism
lcic00460
Cyanoamino acid metabolism
lcic00630
Glyoxylate and dicarboxylate metabolism
lcic00670
One carbon pool by folate
lcic00680
Methane metabolism
lcic01100
Metabolic pathways
lcic01110
Biosynthesis of secondary metabolites
lcic01120
Microbial metabolism in diverse environments
lcic01200
Carbon metabolism
lcic01230
Biosynthesis of amino acids
lcic01240
Biosynthesis of cofactors
lcic04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
lcic00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
INQ41_02245
09102 Energy metabolism
00680 Methane metabolism
INQ41_02245
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
INQ41_02245
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
INQ41_02245
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
INQ41_02245
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
INQ41_02245
Enzymes [BR:
lcic01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
INQ41_02245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
DUF732
Motif
Other DBs
NCBI-ProteinID:
QOW19909
UniProt:
A0A7S6ZSP9
LinkDB
All DBs
Position
503156..504409
Genome browser
AA seq
417 aa
AA seq
DB search
MFPRDARIEGFDPELAQAIADENRRQEDHVELIASENYASPRVMEAQGSQLTNKYAEGYP
GKRYYGGCEFVDIAEQLAIDRLKELFGADYANVQPHSGSQANQAVYFSLLQPGDTVLGMS
LAHGGHLTHGAKVNISGKLFNIVQYGVDDAGMIDYDEMERVALEHKPKMLIGGFSAYSQV
VDWARMREIADKVGAIFFVDMAHVAGLIAAGVYPNPLPHAHVVTSTTHKTLRGPRGGIIL
AKNPSEDLVKKLQSIVFPGLQGGPLMHVIAAKAVAFKEALEPEFKAYQQQVVKNAQAMAE
TILHRGYKIVSGGTKNHLMLIDMIGKGITGKDAEAALGKAHITVNKNAVPNDPAKPFVTS
GLRIGTPAVTTRGYREPDCVALANWICDVLDNPNDEQVIAAVRENVTQQCAQFPVYG
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttcccgcgcgacgcacgcatcgaaggttttgaccccgaactcgcccaggccatcgcc
gacgagaaccgccgccaggaagaccacgtcgagctgatcgccagcgagaactacgccagc
ccgcgggtgatggaggcgcagggcagccagctgaccaacaagtacgccgagggctacccc
ggcaagcgctattacggcggctgcgagttcgtcgacatcgcagagcaactggcgatcgac
cggctgaaggaactgttcggcgccgactacgccaacgtgcagccgcactcgggttcgcag
gccaaccaggcggtgtatttctcgctgctgcagcccggtgataccgttctcggcatgagc
ctggcccacggcggccacctcacccacggcgccaaggtcaacatcagcggcaagctgttc
aacatcgtccagtacggcgtcgatgacgcgggaatgatcgactacgacgagatggagcgc
gtggcgctcgagcacaaaccgaagatgctgatcggcggcttcagtgcctactcgcaggtg
gtggactgggcgcggatgcgcgagatcgccgacaaggtgggcgcgatcttcttcgtcgac
atggcccacgtggccggcctgatcgccgccggcgtgtaccccaacccgctgccgcacgcg
cacgtggtgacctcgacgacccacaagaccctgcgcggcccgcgcggcggcatcatcctg
gccaagaacccgagcgaggacctggtcaagaagctgcagagcatcgtcttccccggcctg
cagggcggcccgctgatgcacgtgatcgcggccaaggcggtggccttcaaggaagcgctg
gagcccgagttcaaggcctaccagcagcaggtggtcaagaacgcccaggcgatggcggaa
accatcctccatcgcggctacaagatcgtctccggcggcacgaagaatcacctgatgctg
atcgacatgatcggcaagggcatcaccggcaaggacgcggaggcggcgctgggcaaggcc
cacatcaccgtcaacaagaacgccgtgcccaacgacccggccaagccgttcgtgacctcg
ggcctgcgcatcggcaccccggcggtgaccacccgcggctatcgcgagccggactgcgtc
gccctggccaattggatctgcgacgtgctcgacaaccccaacgacgagcaggtcatcgcc
gcggtgcgtgaaaacgtcacgcagcagtgcgcccagttcccggtctacggttga
DBGET
integrated database retrieval system