Novilysobacter ciconiae: INQ41_02610
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Entry
INQ41_02610 CDS
T08092
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
lcic
Novilysobacter ciconiae
Pathway
lcic03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lcic00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
INQ41_02610 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lcic03021
]
INQ41_02610 (rpoA)
03400 DNA repair and recombination proteins [BR:
lcic03400
]
INQ41_02610 (rpoA)
Enzymes [BR:
lcic01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
INQ41_02610 (rpoA)
Transcription machinery [BR:
lcic03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
INQ41_02610 (rpoA)
DNA repair and recombination proteins [BR:
lcic03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
INQ41_02610 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Aconitase_B_N
DUF2490
Motif
Other DBs
NCBI-ProteinID:
QOW19970
UniProt:
A0A7S6ZSM5
LinkDB
All DBs
Position
565230..566228
Genome browser
AA seq
332 aa
AA seq
DB search
MTVTANQVLRPRGPQIERLTDNRARVVIEPLERGYGHTLGNALRRVLLSSIPGFAITEVE
IDGVLHEYTTVEGLQEDVLEVLLNLKDVAITMHSGESATLSLSKQGPGVVTAADIKTDHN
VEVVNGDHVIAHLTKDTALSMRIKVERGYGYQPATSRRNPEEETRTIGRLMLDASFSPVR
RVAYSVEAARVEQRTDLDKLIIDIETNGTIDAEEAVRTAAEVLSDQLSVFGDFTQRERGA
AKPASTGIDPVLLRPIDDLELTVRSANCLKAESIYYVGDLIQKTEVELLKTPNLGKKSLT
EIKEVLAQRGLSLGMKLENWPPAGIASHGMMG
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgacggttaccgccaatcaggtgctgcgcccacgcggtccccagatcgaacgcctcacc
gacaaccgcgcacgggtggtcatcgagccgctcgagcgtggctacggtcacacgctgggc
aacgcgttgcgccgggtcctgctgtcctcgatcccgggctttgcgattaccgaagtcgag
atcgatggcgtgctgcacgaatacaccacggtcgaaggattgcaggaggacgtgctcgag
gtcctgctcaacctgaaggacgtcgccatcaccatgcactccggcgagtcggcgaccctg
tcgctgagcaagcagggtcccggcgtggtgaccgcggctgatatcaagaccgaccacaac
gtcgaagtcgtcaacggcgaccacgtgatcgcgcacttgaccaaggacaccgcgctcagt
atgcgcatcaaggtcgagcgtggttacggctaccagcccgcgaccagccgccgcaatccg
gaggaggagacccgcaccatcggtcgtctcatgctggatgcgagcttcagcccggtccgc
cgcgtggcgtactcggtggaagccgcacgcgtcgagcagcgcaccgacctggacaagctg
atcatcgacatcgagaccaacggcaccatcgacgcggaagaggcggttcgcaccgccgcg
gaagtgctcagtgaccagctgtcggtgttcggcgacttcacccagcgcgagcgcggtgca
gccaagccggccagcaccgggatcgatccggtgttgctgcgtccgatcgacgatctggaa
ctgaccgtgcgctcggccaactgcctcaaggcggaaagcatctactacgtcggcgatctg
atccagaagaccgaagtcgaactgctgaagacgccgaacctcggcaagaagtcgctcacc
gagatcaaggaagtgcttgcccagcgcggcctctcgctcggcatgaagctcgaaaactgg
ccgcctgcaggcatcgcctcgcacggcatgatgggctaa
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