Novilysobacter ciconiae: INQ41_03985
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Entry
INQ41_03985 CDS
T08092
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
lcic
Novilysobacter ciconiae
Brite
KEGG Orthology (KO) [BR:
lcic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lcic03016
]
INQ41_03985 (truD)
Enzymes [BR:
lcic01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
INQ41_03985 (truD)
Transfer RNA biogenesis [BR:
lcic03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
INQ41_03985 (truD)
Prokaryotic type
INQ41_03985 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Bac_rhamnosid_C
Motif
Other DBs
NCBI-ProteinID:
QOW20202
UniProt:
A0A7S6UH49
LinkDB
All DBs
Position
873747..874826
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AA seq
359 aa
AA seq
DB search
MSDASAPGPEDSAPAADTRAHGEPVLSARMRVTPEDFFVEELAGFEPSGSGEHLLLTVQK
RGMNTAFAARSIAQWAGVDDMAIGYAGLKDRHAVTRQRFSVHLPRKVAPDVAALQVDGLQ
VLEQAWHAKKLPRGALAGNRFVLVLRDVVGDSAPIEARLQQIARRGVPNFFGEQRFGRDG
NNLGKALAMFEGRRVRRDERSMLLSAARSVLFNQVLQARVEAHCWDTPLTGEVWMLDGSR
SVFGPEPLTPEIGQRLSAFDIHPSGPLWGRGELRSQADALELEQGALADPISMQLRAGLD
QAGLKQERRSLRLRAEALRWQWLDAATLELSFNLPPGTYATVVLAELGEVRDGSGQSGA
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacgccagcgcgcccggacccgaggacagtgcgcccgccgctgacacgcgcgcc
cacggcgagcccgtgctgtccgcccggatgcgcgtcacgccggaggacttcttcgtcgag
gaactggccggctttgaaccctctggcagcggcgagcacctgcttctgacggtgcagaag
cgcggcatgaacaccgctttcgccgcccgcagcattgcccagtgggccggcgtggacgac
atggcgatcggctacgccgggctgaaggatcgccacgcggtgacccgccagcgcttcagc
gtgcacctgccgcgcaaggtcgccccggacgttgccgcgttgcaggtggacggactgcag
gtgctggaacaggcgtggcacgcgaaaaagctcccgcgcggtgcgctggccggcaaccgc
ttcgtgctcgtcctgcgcgacgtcgtcggcgattcggccccgatcgaggcgcgcctgcag
cagattgcccggcgcggcgtgccgaacttcttcggcgagcagcgctttggccgcgatggc
aacaacctgggcaaggcgctggcgatgttcgaaggccgccgggtgcgtcgcgacgagcgc
agcatgctgctctcggccgcgcgctcggtcctgttcaaccaggtgctgcaggcgcgggtc
gaggcgcactgctgggatacgccattgacgggcgaggtgtggatgctcgatggcagccgc
agtgtgttcgggcccgagccgctcactccggagatcggacagcgcctgtcggcgttcgac
atccatcccagcggcccgctgtggggccgcggcgagctgcgcagccaggccgatgcgctg
gagctggagcagggcgcgctggccgaccccatatcgatgcaactgcgtgccggtctggac
caggcaggcctgaagcaggagcggcgatccttgcgcctgcgcgccgaggccctgcgctgg
caatggctggacgccgcgacactggagctgtcattcaatctgccgccgggcacctacgcc
actgtggtgctggcggagctgggcgaggtgcgcgacggctccggccagtccggggcctga
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