Lysobacter ciconiae: INQ41_04200 Help Entry INQ41_04200       CDS       T08092                                  Name (GenBank) RNA polymerase factor sigma-54   KO K03092   RNA polymerase sigma-54 factor Organism lcic  Lysobacter ciconiae Pathway lcic02020   Two-component system lcic02040   Flagellar assembly Brite KEGG Orthology (KO) [BR:lcic00001]  09130 Environmental Information Processing   09132 Signal transduction    02020 Two-component system     INQ41_04200  09140 Cellular Processes   09142 Cell motility    02040 Flagellar assembly     INQ41_04200  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:lcic03021]     INQ41_04200 Transcription machinery [BR:lcic03021]  Prokaryotic type   Bacterial type    RNA polymerase     Sigma factors      INQ41_04200 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Sigma54_DBD Sigma54_CBD Sigma54_AID HTH_IclR HTH_38 Sigma70_r4 HTH_Crp_2 HTH_23 MarR_2 HTH_3 BetR Sigma70_r4_2 HTH_AraC Motif Other DBs NCBI-ProteinID:  QOW20242 UniProt:  A0A7S6UH94 LinkDB All DBs Position complement(919922..921355) Genome browser AA seq 477 aa AA seqDB search MKPQLQTSLGQSLVMTPQLQQAIRLLQMSSVELEAELAAAVESNPLLDWTDQPSEPAMAE AAGAIDGSGGALAHEGDTPAPPEADWGPDDGEVWYQRVGPLDPDNDRDPAEQVAESESLQ DYLLWQLHLSHLSPRDRQIAVVLIEAIDDAGYFRDSPASVAETLAPELIVDEAEVVTVLH QIQRFDPIGVGARDLTECLSLQLQYLEECTPGRALALSLARDHLERLPKVGAAGLAAELK LPLAEVETAISLLRSLEPRPGAGIGAIAEDSYVAPDIVIWRQHGMWRVALSDSMRPRIGI HRGYESMIRHADGADANYLKGHLQEARWLLKSLEARGVTMLKVARCLISQQAGFLEFGNA ALRPLTLREVAAEIGMHESTVSRAIARKYARTPRGTIPLRAFFASGIDTGSGGEASSVAI QSMIRELIQAENPRKPLSDARLAETLKAAGVPVARRTVAKYREAMGIVSSQDRVRMA NT seq 1434 nt NT seq  +upstreamnt  +downstreamnt atgaagccccaactccagacctcgctcggccagagccttgtgatgaccccgcagttgcag caggccatccgcctgctgcagatgtcgtcggtcgagctggaggcggaactggcggcggcg gtggagagcaatcccctgctggactggaccgatcaacccagcgagccggcgatggcggaa gccgccggcgcgatcgatgggtctggcggcgcgctggcgcacgagggcgacacccctgct ccacccgaggcggactggggtcccgacgacggcgaggtctggtaccagcgcgtcgggccg ctcgatcccgacaacgaccgcgaccccgccgagcaggtcgccgagtcggagagcctgcag gactacctgctgtggcagctgcacctgagccacctgtcgccgcgtgaccgccagatcgcg gtggtgctgatcgaggcgatcgacgacgcgggctatttccgcgattcgcccgcgtcggtc gccgaaaccctcgcccccgagctcatcgtggacgaggcggaggtcgtcaccgtcctgcac cagatccagcgcttcgacccgatcggcgtcggcgcgcgcgatctgactgaatgcctgagc ctgcaactgcagtatctggaggaatgcacgcccgggcgcgcgctcgcgctcagcctcgcg cgcgaccacctggaacgcctgccgaaggtgggcgcggccggcctggccgccgagctgaaa cttcccctcgcggaggtcgaaaccgccatcagcctgctgcgctcgctggagccgcgaccc ggtgccggcatcggcgcgattgccgaagacagctacgtcgcccctgacatcgtcatctgg cgccagcacggcatgtggcgggtcgcgttgtcggacagcatgcgcccgcgcatcggcatc caccgcggctacgaaagcatgatccgccacgccgacggcgccgacgccaattacctcaag ggccacctgcaggaggcgcgctggctgctcaagagcctggaggcgcgtggggtgacgatg ctgaaggtcgcccgatgcctgatcagccagcaggccggtttcctggagttcggcaacgcc gccctccgcccgctgaccctgcgcgaagtcgccgccgagatcggcatgcacgaatccacg gtctcgcgcgcgatcgcccgcaagtacgcacgcacgccgcgcggcacgattcccctgcgg gcgtttttcgcctccgggatcgacaccggcagcggcggcgaggcgtcgagcgtcgccata cagtcgatgatccgcgagctgatccaggccgagaacccgcgcaagcccctgtcggatgcg cgcctggccgaaaccctcaaggccgccggcgtcccggtcgcccgccgcaccgtcgccaag taccgcgaagcgatggggatcgtgtcctcgcaggatcgcgtacggatggcctga

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