Novilysobacter ciconiae: INQ41_04430
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Entry
INQ41_04430 CDS
T08092
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
lcic
Novilysobacter ciconiae
Pathway
lcic00521
Streptomycin biosynthesis
lcic00523
Polyketide sugar unit biosynthesis
lcic00525
Acarbose and validamycin biosynthesis
lcic00541
Biosynthesis of various nucleotide sugars
lcic01100
Metabolic pathways
lcic01110
Biosynthesis of secondary metabolites
lcic01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
lcic00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
INQ41_04430 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
INQ41_04430 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
INQ41_04430 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
INQ41_04430 (rfbB)
00525 Acarbose and validamycin biosynthesis
INQ41_04430 (rfbB)
Enzymes [BR:
lcic01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
INQ41_04430 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
adh_short
Motif
Other DBs
NCBI-ProteinID:
QOW20281
UniProt:
A0A7S6UHD0
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Position
966104..967159
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AA seq
351 aa
AA seq
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MPTWLVTGGAGFIGGNFVLDAVGRGIKVVNLDALTYAGNLDTLSSLDGDTSHVFVHGDIG
DATLVARLLREHQPDAVINFAAESHVDRSIDGPAEFVQTNVVGTLNLLERVRDYWKSRDG
TRAADFRFLHVSTDEVYGTLGDTGKFTETTPYAPNSPYSASKAASDHLVRAFHHTYGLPV
LTTNCSNNYGPYQFPEKLIPLIIAKALAGEPLPIYGDGLNVRDWLFVSDHCAAIRRVLEA
GRVGEVYNVGGEAERTNIVVVQTICRLLDQRRPLADGRKRESLITYVQDRPGHDRRYAID
ASKLHGELAWEPAITFDEGMARTVDWYLDNAPWVQRVMDGSYRLERIGGVA
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgccgacgtggttggtgaccggcggagccggttttattggtggaaatttcgtcctcgat
gcagtcggtcgcggcatcaaggtcgtcaatttggacgccctgacctacgcgggcaatctg
gacacgttgtcgtcactggatggcgatacgtcccacgtgttcgtgcacggcgacatcggc
gacgccactctggtggcccgcctgctgcgcgagcaccagcccgacgcggtgatcaatttc
gccgccgagagccatgtggatcgctccatcgatggccccgccgagttcgtccagaccaat
gtggtgggcacgctcaacctgctggagcgggtccgcgactactggaagtcgcgggacggc
acgcgcgcggcggatttccgcttcctgcacgtctccaccgacgaggtctacggcaccctg
ggggatacggggaagttcaccgaaaccacgccgtacgcgcccaactcgccgtactccgct
tccaaggcggcgtccgaccacctggtgcgtgcgttccaccacacctacggcctgccggta
ctcaccaccaactgctccaacaactacgggccttaccagttcccggaaaagctcatcccg
ctgatcatcgccaaggcgctggccggcgagccgctgccgatctacggcgatggcctcaac
gtgcgcgactggctgttcgtgtccgaccactgcgcggcgatccgacgtgtgctggaggca
ggtcgggtgggcgaggtctataacgtcggcggtgaggcggaacgcaccaacatcgtcgtg
gtgcagacgatctgccggctgcttgaccagcgccggccgctggccgacggccgcaagcgc
gaatcgctgatcacctacgtccaggaccgccccggccatgaccgccgctacgcgatcgat
gccagcaagctgcacggcgaactggcctgggagccggcgatcacctttgatgagggcatg
gcccggaccgttgactggtacctggacaacgcgccgtgggtgcagcgggtgatggacggc
agctaccggctcgagcgcatcggtggcgtcgcgtga
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