KEGG   Novilysobacter ciconiae: INQ41_04680
Entry
INQ41_04680       CDS       T08092                                 
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
  KO
K03702  excinuclease ABC subunit B
Organism
lcic  Novilysobacter ciconiae
Pathway
lcic03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:lcic00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    INQ41_04680 (uvrB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lcic03400]
    INQ41_04680 (uvrB)
DNA repair and recombination proteins [BR:lcic03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     INQ41_04680 (uvrB)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      INQ41_04680 (uvrB)
SSDB
Motif
Pfam: UvrB_inter UvrB_3rd UvrB Helicase_C ResIII UVR DEAD UB2H AAA_30 AAA_22 DUF87 TrwB_AAD_bind Kinesin
Other DBs
NCBI-ProteinID: QOW20327
UniProt: A0A7S6ZSX2
LinkDB
Position
1018943..1021030
AA seq 695 aa
MNDAAHTPSAPTDAPPERFPGARQREGTFELVSPYSPAGDQPQAIEKLVEGFEAGLAHQT
LLGVTGSGKTYTIANVIQQVQKPTLVMAPNKTLAAQLYGEFKSFFPNNAVEYFVSYYDYY
QPEAYVASSDTFIEKDSSVNEHIEQMRLSATKALLERRDAIIVCTVSAIYGLGDPNEYFR
MVLHMVRGERIDQRELIRRLTEMQYSRNDTELRRGTYRVRGEVIDVHPAESEMEAVRIEL
FDGEIENVSTFDPLTGESLRKLQRYTIYPKSHYVTTRRTVLDAVDAIKDELRVRLEQLYA
QNKLLEAQRLAQRTQFDLEMLAEVGYCNGVENYSRHLTGHMPGEPPPCLFDYLPPDALLV
VDESHVTIPQIGAMYKGDRSRKETLVEFGFRLPSALDNRPLRFEEWEGRSPRSIYVSATP
RAYELEKSEGQVVELVVRPTGLIDPEVEVRPVATQVDDVLGEINLRVAMGDRVLITTLTK
RMAENLTEYLAEHDVRVRYLHSDIDTVERVEIIRDLRLGKFDVVVGINLLREGLDMPEVS
LVAILDADKEGFLRSTGSLIQTIGRAARNVRGKAILYADKVTDSMKRAIEETDRRRGKQV
EYNTEHGITPTSVNRAVMDVMEGARVDPAALKERNRARQVAEELAEYAALNPAQLSARIK
KLEQKMYQHARDLEFEEAGAVRDQLHLLKQQGFGV
NT seq 2088 nt   +upstreamnt  +downstreamnt
atgaacgacgcagcgcacaccccatccgccccaacggatgcccctcccgagcgcttccct
ggcgcgcggcagcgcgaggggacctttgagctggtatcgccctattcgccggctggcgac
cagccacaggcgattgagaagcttgtggaagggttcgaggccgggctggcgcaccagacg
ctgctgggcgtcaccggctcgggcaagacctacaccatcgccaacgtcatccagcaggtg
cagaagccgacgctggtgatggcgcccaacaagacgctcgccgcgcagctgtacggggag
ttcaagtcgttcttccccaataacgcggtcgagtacttcgtcagctactacgactactac
cagcccgaggcctatgtggcgtcgtcggacacctttatcgagaaggacagttcggtcaac
gagcacatcgagcagatgcggctctcggcgaccaaggcgctgctggagcggcgcgacgcg
atcatcgtgtgcaccgtctcggcgatctacggcctgggcgatccgaacgagtacttccgc
atggtgctgcacatggtgcgcggcgagcgcatcgaccagcgcgagctgatccgccggctc
accgagatgcagtactcgcgcaacgacaccgagctgcgccgcggcacgtatcgcgtgcgt
ggcgaggtgatcgacgtgcatccggccgagtcggagatggaagcggtgcggatcgagctg
ttcgatggtgagatcgagaacgtctcgacctttgatccgctcaccggcgagagcctgcgc
aaactgcagcgttacacgatctaccccaagtcccactacgtcaccacgcggcgcacggtg
ctggacgccgtggatgccatcaaggacgaactgcgcgtacgcctggagcagttgtacgcc
cagaacaagctgctggaggcgcagcggctcgcgcagcgcacccagttcgatctggagatg
cttgccgaggtcggctactgcaacggcgtggagaactacagccggcacctgaccggccac
atgcccggcgagccgccgccgtgcctgttcgactacctgccgcccgacgcgctgctggtg
gtggacgagtcgcacgtgaccattccgcagatcggcgcgatgtacaagggcgaccggtcg
cgcaaggagaccctggtggagttcggtttccgcctgccgtccgcgctggataaccgcccg
ctgcgtttcgaggagtgggaagggcggtcgccgcgatcgatctacgtgtccgccacgccg
cgtgcctacgagctggagaaatccgaaggccaggtcgtcgaactggtcgtgcgtccgacc
ggactcatcgaccctgaagtggaggtgcgccccgtcgccacccaggtcgatgacgtgctc
ggcgagatcaacctgcgcgtcgcgatgggtgatcgcgtgctgatcacgacgctgaccaag
cgcatggccgagaacctcaccgagtacctcgccgagcacgatgtgcgcgtgcggtacctg
cactcggacatcgacacggtcgagcgggtggagatcatccgcgacctgcgcctgggcaaa
ttcgatgtggtggtgggcatcaacctgctgcgcgagggcctggacatgcccgaggtgtcg
ctggtggcgatcctggatgccgacaaggagggcttcctgcgctcgacgggctcattgatc
cagaccatcggccgggcggcccgcaacgtgcgcggcaaggcgatcctctacgccgacaag
gtaaccgactcgatgaagcgggcgatcgaggagaccgaccggcgccgcggcaagcaggtc
gagtacaacaccgagcacggcatcacgccgacgtcggtgaaccgtgcagtgatggacgtc
atggaaggcgcgcgtgtggatccggccgcgctgaaggagcgtaaccgcgcgcgtcaggtc
gccgaggagctggcggagtacgcggcgctcaatcctgcgcaactgtcggcgcggatcaaa
aagctcgaacagaagatgtaccagcacgcgcgggatctggaattcgaggaggccggcgcc
gtgcgcgaccagctgcacctgctgaaacagcagggcttcggcgtctga

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