Novilysobacter ciconiae: INQ41_05965
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Entry
INQ41_05965 CDS
T08092
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
lcic
Novilysobacter ciconiae
Pathway
lcic03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lcic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
INQ41_05965 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lcic03400
]
INQ41_05965 (recC)
Enzymes [BR:
lcic01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
INQ41_05965 (recC)
DNA repair and recombination proteins [BR:
lcic03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
INQ41_05965 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
QOW20553
UniProt:
A0A7S6ZT42
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All DBs
Position
1298910..1302614
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AA seq
1234 aa
AA seq
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MTSVDKRGQLREAEGAAQTTGLVIYRASRLEMLLGPLRELLAVTRPANVLAPQTIIAAHP
GMKQWLNGALARAYGPGGIVANLDIQLPSTWIGNLAERQLGQQAVSLPRYQREHLRWNIH
ELLGSGLDTIGVTDARIASYLQPADADARHAGADVARRRFQLADRLARIYSQYVVYRPDW
LDAWEHGRLDAVTGQGGDPRMSSTEQRLLAPLWRHLRAQLGPHRGDVVTTLIDRLLDRNV
GGGDALHVFGVSHLAPSELAVIRAAARHRLVAMYVPDPCREYWGGLGNTVAEIQQRREAE
LAGLEGAGAGDYWIEQDNPLLASWGRMGQHFIMALADGSDEVLADVRHRADEDASSPVNR
LQRVQESIRALAPLPEAVELRQPALIECEIADASLRVHASHTRLRELEILRDQLLDAIES
TDQHGEPIRPADIVVMAPDIRSYVPLIPAVFGVAGHGGERLPYHLADVSVARSHSLFGAF
QRLLDLPGTRVTAPEVVDLLAIPEIAGRLGLDAGAVDELSGWLQASRVAWALDPAFRSRF
GVPAIAEHTFGWSMDRMMAGYLMADRADSEHQPSVALPGGVAIAPLTGIHGPAAAHLGAL
DHLLREIQALCDLAEESRPASAWAEELERRFEAMFRIDLMDADARDAKAVLLGFIRTLAT
ETAKAEVDPELHFSVVRDLLVERLAAAPERQRFLMGGITFCGMVPQRAIPFKVVAVLGLN
DGEFPRNSSDAGLDLMARYRRLGDRDVRSDDRYLFLETLMSARERLHLSYLGEGVMDGKP
RNPAQPLSELLAVLDASAGLAADDTDTPRPWIIRHPLQPFDARYYDGSDARLFSYQQDFA
AMHAQGAHPDVAPFLDLDGTGEVVLEGPVALREVQAYYRDPAAQVLGRRMQISLDALVDD
RLPSEEPVDPRFGALDSVPRKLFFNDALPAWPDAQWPPERAPDWLRLGGIMPPGRPGVQA
WEDSAAAVAKLLERLGDLPAFEHGVPAPVSVVIDQPIGDVALVGQVGHVYRLSHEGREHW
QMLRAFPGQGGALKAEKDLDFKDRVPMFMDWGLLRVHTAGGGGRMPTVRLAMLVDDEIPG
WSGALNAWDEAFVEAAPDERSQLLSDLQRRLSRLLHWWQQAQGRPRWYFPKIAWKAIQPT
VSPRSGAGGRGDREPAPANVESIWVATHDGGTGERDYAPGYSRLLAGGVDFAGGSNELAE
LHRFALALHECIDMASPLRHNATADESACMERQQ
NT seq
3705 nt
NT seq
+upstream
nt +downstream
nt
gtgacgtcagtcgacaagcgtggacagttgcgggaagcggagggggcggcgcagaccacc
ggtctggtgatctaccgtgccagccggctggaaatgctgctcggtccgctgcgcgagttg
ctggccgtgacccgcccggccaatgtcctcgccccgcagaccatcatcgccgcgcatccg
ggcatgaagcagtggctgaacggcgcgcttgcccgcgcttacggaccgggcggcattgtg
gccaacctcgacatccagctgccgagcacgtggatcggcaacctggccgagcggcagctg
ggccagcaggcggtgtcgctgccgcgctatcagcgcgagcacctgcgctggaacatccat
gaacttctaggcagcgggctggatacgattggtgtcaccgatgcgcgcatcgcgtcctac
ctccagccggcggacgccgacgcgcggcatgccggcgctgacgtggcgcggcgccggttc
cagctcgccgaccgcctggcgcggatctattcccagtacgtggtctaccggcccgactgg
ctcgacgcctgggagcacggacgcctggatgcggtcaccggtcagggcggcgatccccgc
atgagttccaccgagcagcggctgttggcgccgctttggcggcatctgcgcgcgcagctg
gggccgcaccggggcgacgtcgtcacgactctcatcgaccgactgctggaccgcaacgtc
ggcggcggtgatgcgctgcatgtctttggtgtcagtcatctggcgccttccgagctggcg
gtgatccgcgccgcggcccgccaccggctggtggcaatgtacgtccccgatccctgccgt
gagtactggggtggcctgggcaacacggtggcggagatccagcagcggcgcgaggccgaa
ctggccgggctggaaggcgccggcgcaggcgattactggatcgagcaggacaatccgctg
ctggccagttggggccggatgggccagcacttcatcatggcgctggccgatggcagcgat
gaggtgttggccgacgtgcgccatcgggccgacgaggacgcctcgtcgccggtcaaccga
cttcagcgcgtgcaggaaagcatccgcgcgttggcgccgttgcccgaggcggtggagctc
cggcagccagcgctcatcgagtgtgagatcgccgacgcgtcgttgcgggttcatgccagc
cacacccgcctgcgtgagctcgaaatcctccgcgaccagctgctcgacgcgatagaaagc
acggaccagcacggcgagccgatccgtcctgcggacatcgtcgtgatggcgccggacatc
cgctcctatgtgccgctgattcccgccgtgttcggtgtcgccgggcacggcggggagcgc
ctgccgtaccacctggccgatgtttcggtggcgcgcagccactcgttgtttggtgcgttc
cagcgcctgctcgatctgcccggcacccgcgtcaccgcacccgaggtggtggatctgctg
gccatccccgagatcgccggtcgcctgggtctggatgctggcgcggtggacgagctgagc
ggctggttgcaggcgagccgcgtggcgtgggcgctggatccggcgttccgcagccggttc
ggcgtgccggcgatcgccgagcacaccttcggctggtcgatggaccggatgatggccggc
tatctgatggcggaccgcgccgacagcgagcaccagccatcggtggccctgccgggcggc
gtcgccattgcgccgctgaccggcatccacggcccggccgccgcccatctgggcgcgctg
gatcacctgttgcgcgagatccaggcgctttgtgatctagccgaagaatcccgtccggcg
agcgcctgggcggaggaactggagcgccgattcgaggcgatgttccggatcgacctgatg
gacgccgacgcccgcgacgcaaaggccgtgctgctgggtttcatccgcacgctggcgacg
gaaaccgcgaaagccgaggtcgaccccgaactgcatttcagcgtcgtccgcgacctgctg
gtcgaacgcctcgccgctgcgccggagcggcagcgctttctgatgggcggcatcactttt
tgcgggatggttccgcagcgggcgatcccgttcaaggtggtcgccgtgcttggcctgaac
gacggcgagtttccgcgcaacagcagcgacgccggcctggacctgatggcgcgctatcgg
cggctcggcgaccgtgacgtgcgcagcgacgaccgctacctgttcctggaaaccctgatg
tcggcccgcgagcggttgcacctgagttacctgggcgaaggggtgatggacggcaagccg
cgaaaccctgcgcagccgctgtcggagctcttggcggtactggatgcgtccgccggcctc
gccgccgacgacaccgacacgccgcggccctggatcatccgtcaccccctgcagcccttc
gatgcccgctattacgacggcagcgacgcgcgcctgttctcctatcaacaggacttcgcc
gcgatgcacgcccagggcgcacaccccgacgtcgccccgttcctcgatctcgacggcacc
ggcgaggtggttctcgagggcccggttgcattgcgggaggtacaggcctactaccgcgac
cccgccgcgcaggtgctgggccggcgcatgcagatcagcctggacgcgctggtggatgat
cgcctgcccagcgaggagccggtcgatccccggtttggcgcgctggattcggtgccgcgg
aagctgttcttcaacgatgcgctgccggcctggccggatgcgcagtggccgcccgaacgt
gcgccggactggctgcgcctgggcggcatcatgccgccggggaggccgggcgtgcaggcc
tgggaagactccgcggcggcggtggcaaaactgctcgaacggctgggcgatctgccggcg
ttcgagcatggcgtgccggcgccggtcagcgtggtgattgatcagcccatcggggatgtc
gcactggtcggtcaggttggtcacgtgtaccggctcagccatgagggccgcgaacactgg
cagatgctgcgcgcatttcccggccagggtggcgctttgaaggcggagaaggatctggat
ttcaaggaccgcgtgccgatgttcatggactggggcttgctgcgcgtgcatacggcgggc
ggcggtgggcggatgccgacggtgcgtttggcgatgctggtcgacgacgagattccaggc
tggtccggcgcgctgaacgcctgggacgaggcctttgtggaggcagcgccggatgaacga
tcgcagctgctgagtgatctgcagcggcggctctcgcgcttgctgcactggtggcagcag
gcgcagggcaggccacgctggtacttcccgaaaatcgcctggaaggcgatccagccgacg
gtcagtccgcgcagcggtgccggcgggcggggtgatcgcgagccagcgcctgcaaacgtc
gagagtatctgggtggcgacgcacgacggcggcaccggcgagcgtgactacgcgcctggc
tacagccggctgctggccggtggcgtggatttcgccggcggcagcaacgagctggccgaa
ctgcaccgctttgccttggcgcttcacgaatgcatcgacatggcatcgccgctgcggcac
aacgcgaccgccgacgaatctgcttgcatggagaggcagcaatga
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