Novilysobacter ciconiae: INQ41_07860
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Entry
INQ41_07860 CDS
T08092
Symbol
sbcD
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
lcic
Novilysobacter ciconiae
Brite
KEGG Orthology (KO) [BR:
lcic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lcic03400
]
INQ41_07860 (sbcD)
DNA repair and recombination proteins [BR:
lcic03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
INQ41_07860 (sbcD)
Archaeal homologous recombinant proteins
INQ41_07860 (sbcD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
QOW18625
UniProt:
A0A7S6UE67
LinkDB
All DBs
Position
complement(1725412..1726638)
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AA seq
408 aa
AA seq
DB search
MRLLHTSDLHLGQNFLGQSREAEHAAFLDWLVEQVQQHRVDAVLVAGDVFDTGTPPSYAR
EQYNRFIVGIRDAGARLIVLGGNHDSPAMLAESRGLLARLDTLVVPTLMQSPEEHVHRIP
GRDGGPGMILCAVPFIRSRDVSRSEAGQSAEDKRGAMMDGIASHYARIHEAAVAMREAAG
EPLPIIASGHLTTVGASTSDSVREIYVGSLNAFPTSAFPPAAYIALGHIHQPQKVGGLDH
IRYSGSPIPLSFDEIGQAKQVLLVELQGEQLHEVTPLPVPRFRVLARAAGTLASLPAQLA
AIAGEVPDGGLGWVEVMVEVDDYLPDLQNRVAELVEALPLEVLRIRRKRSAAHAVIDAAD
GQHLDELQPREVFAQRLAQEEDLTDARVERLHACFDEVLADIEGGEPA
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctgctgcacacctccgatctccatcttggccagaactttctcggccaatcgcgc
gaagccgagcatgcggcgttcctggactggctggtcgagcaggtgcagcagcaccgcgtg
gatgcagtgctggtggccggcgacgtgttcgataccggcaccccgcccagctacgcgcgc
gagcagtacaaccgcttcattgtcggcattcgcgacgcgggtgcgcgcctgatcgtgctg
ggcggcaaccacgactcaccggcgatgctggcggaatcgcgcggcctgctggcgcggctg
gacacgctggtggtgccgacgctgatgcagtcgccggaagagcacgtgcaccggatcccc
ggccgcgatggcggtccggggatgatcctgtgcgcggtgcccttcatccgctcgcgcgat
gtctcccgcagcgaggccgggcagagcgccgaggacaagcgcggcgcgatgatggacggg
atcgcctcccactacgcgcgcatccacgaggccgccgtcgcgatgcgcgaggccgccggc
gagcctctgccaatcatcgccagcggccacctgaccaccgtgggcgccagcaccagcgac
tcggtgcgcgagatctatgtcggctcgctcaacgcctttcccaccagtgcgtttccgccg
gccgcctacatcgcgctggggcatatccaccagccgcagaaggtcggcgggctggaccat
atccgctacagcggctcgccgattccgctcagctttgacgagatcggccaggccaagcag
gtgctgctggtcgagctgcagggcgagcagttgcatgaggtcacaccgttgccggtgccg
cgcttccgcgtgctggcgcgggcggccggcacgctcgccagcctgccggcgcaactggcc
gctatcgccggcgaggtgccggacggcgggctcggctgggtcgaggtcatggtcgaggtg
gatgactatctgcccgacctgcagaaccgggtcgccgagctggtcgaagcgctgccgctg
gaggtgttgcgcatccgccgcaagcgcagcgcagcccatgcggtgatcgatgccgccgac
ggccagcacctggacgagctgcagccgcgtgaggtgttcgcccagcgcctggcccaggag
gaggacctgacggacgcgcgcgttgaacggctgcacgcgtgtttcgatgaggtgctggcc
gacatcgaagggggggagccggcatga
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