Novilysobacter ciconiae: INQ41_08390
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Entry
INQ41_08390 CDS
T08092
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
lcic
Novilysobacter ciconiae
Brite
KEGG Orthology (KO) [BR:
lcic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lcic03016
]
INQ41_08390 (truB)
Enzymes [BR:
lcic01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
INQ41_08390 (truB)
Transfer RNA biogenesis [BR:
lcic03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
INQ41_08390 (truB)
Prokaryotic type
INQ41_08390 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TruB_C
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
QOW18715
UniProt:
A0A7S6UED2
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All DBs
Position
complement(1844950..1845897)
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AA seq
315 aa
AA seq
DB search
MTHAGKRPRTRFRSLDGLLLLDKPAGLSSNQAMQRARHLFRARKAGHTGSLDPLATGLLP
ICFGEATKIAGLLLGADKAYLATAVLGVTTDTDDADGAVLRERSVPALTDADIEAALSPL
RGGIEQRAPIYSALKQGGEPLYAKARRGEAIEAPVREVTVHSLELLGRSAQRLQLGVECG
SGTYIRSLVRDLGETLGCGAHVEQLRRTWVDPFLQPRMFTLEALEALAAQGDAFLDAALL
PIEAGLADFARVDVDEVQARAMSYGQPAVPMTPCVADGTVAVHDPSGRVLGIGRLDDAGR
VHPQRLFAWATAPQG
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgacccacgcgggtaaacgtccgcggacgcggtttcgctccctggacggcctgctgctg
ctggacaagcccgctggcctgagctccaaccaggcgatgcagcgtgcgcgtcatctcttt
cgtgcccgcaaggcgggtcacaccggcagcctggacccgctggcgaccggcctgctgccc
atctgctttggcgaggcgaccaagatcgccggcctgctgctgggggccgacaaggcgtat
ctggccacggcggtgcttggcgtcaccaccgataccgacgatgccgacggcgcggtactt
cgcgagcgctccgtccctgcgttgaccgatgccgatatcgaggccgcactgtcgccgctg
cgcggtgggatcgagcagcgcgcaccgatctattccgcgctcaagcagggcggcgaaccg
ctgtatgccaaggcccggcgcggcgaggcgatcgaggcgccggtacgcgaggtaaccgtg
cactccctggaattgctcgggcgcagcgcgcagcgcctccagctcggcgtggaatgcggt
tcgggtacgtacatccgcagcctcgtgcgagacctgggcgaaacgctggggtgcggggcg
catgtcgagcagctccggcgcacgtgggtcgatcccttcctgcaaccgcggatgttcacc
ctcgaggcgctggaggcactggccgcgcagggcgacgcgtttctggacgccgcgctcctg
cccatcgaggccgggctggcggacttcgcgcgggtcgatgtcgatgaggtgcaggcacgc
gccatgagctacgggcaacctgccgtaccgatgacaccctgcgtcgcggacggcacggta
gcggtccacgacccgtccgggcgcgtgctgggcatcggtcgcctggacgacgccggtcgg
gtccatccgcagcgactgttcgcatgggcgacagcgccacagggctga
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