Novilysobacter ciconiae: INQ41_08680
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Entry
INQ41_08680 CDS
T08092
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
lcic
Novilysobacter ciconiae
Pathway
lcic03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lcic00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
INQ41_08680 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcic03019
]
INQ41_08680 (pcnB)
Enzymes [BR:
lcic01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
INQ41_08680 (pcnB)
Messenger RNA biogenesis [BR:
lcic03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
INQ41_08680 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
QOW18766
UniProt:
A0A7S6UEG1
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All DBs
Position
complement(1905533..1906870)
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AA seq
445 aa
AA seq
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MPEQNPSSKPELRIIPRDQHNVSRKDISPNALRVLYRLRDGGFSAYLVGGAVRDLLAGRQ
PKDFDVATSATPEEVKQLFRNCRLIGRRFRLAHVVFGREIIEVATFRANTDDGSGDREQH
EGGRLLRDNVYGTIEDDAVRRDFTANALYYTIEDFSVRDYTGGFEDVQKRLMRLIGDPET
RYREDPVRMLRAVRLAAKLGFEIEPATAEPIPRLASLLSEAASARLFEECLKLFLSGHAV
RSFEGLEARGLLPALFPDTAAALKANRSGALRSVVIDGLRGTDERVANEEPVSPAFLFAL
LLWPAYCRALIALQAQGVQPIDAQRRAADRVTVRQLSTVALPRRFSIPMQEIWLLQSRFS
LRQGKRVSRMLGHPRFRAAFDFLSLRLAASDEHAEDVAFWREQQERVGMGPGQPSPRPRD
DEDAEDDAPARPRRRSRRSTAAAGE
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaacaaaacccatcttccaagcccgaactgcggatcatcccgcgcgaccagcac
aacgtctcccgcaaggacatcagtcccaatgcgctgcgggtgctgtaccggttgcgcgac
ggcggcttctccgcctatctggtaggcggcgcggtgcgcgacctcctggccggtcgccag
cccaaggatttcgacgtggccaccagcgcgacgcccgaggaggtcaagcagttgttccgc
aactgccgcctgatcggccgccggttccgcctggcccatgtggtgttcggccgcgagatc
atcgaggtggcgacgttccgcgccaacaccgacgacggcagcggcgaccgcgagcagcac
gagggcggcaggctgttgcgtgacaacgtctacggcaccatcgaggacgatgcggtccgg
cgcgacttcaccgccaacgcgctgtactacacgatcgaagacttctcggtgcgcgactac
accggcggcttcgaggacgtgcaaaagcggctgatgcggctgatcggcgacccggagacg
cgctaccgcgaggatccggtgcgcatgctgcgcgcggtccggctggcggccaagctcggc
ttcgagatcgaaccggcaacggccgagccgatcccgcggctggcatcgttgctctcggaa
gcagcgtcggcacgcctgttcgaggagtgcctgaagctgttcctctcaggtcacgcggta
aggagttttgaagggctcgaggcgcgcggcctgctaccggcactgttcccggataccgcg
gcggctttgaaggcgaaccgcagcggcgcgttgcgcagcgtggtgatcgatggcttgcgc
gggaccgatgagcgcgtggccaacgaggagccggtgtcgccggcattcctgttcgcactg
ctgttgtggccggcgtattgccgcgcgttgatcgcactgcaggcgcagggcgtgcagccg
atcgacgcgcagcgccgggccgccgaccgggtcacggtgcgccagttgtccaccgtcgcc
ctgccgcgccggttctccattccgatgcaggaaatctggctgctgcagtcgcgcttctcg
ctgcgccagggcaaacgcgtgtcgcggatgctgggccatccccggttccgcgccgcgttc
gacttcctcagcctgcgccttgccgcgtccgatgagcacgccgaggacgtcgcgttctgg
cgcgagcagcaggagcgcgtcggcatgggtccgggtcaaccgagtccacgaccgcgcgat
gatgaggacgccgaggacgatgcaccggcgcgaccgcgccggcgcagccgcagatccacc
gcagccgccggcgaatga
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