Novilysobacter ciconiae: INQ41_10875
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Entry
INQ41_10875 CDS
T08092
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
lcic
Novilysobacter ciconiae
Pathway
lcic03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lcic00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
INQ41_10875 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcic03019
]
INQ41_10875 (recQ)
03400 DNA repair and recombination proteins [BR:
lcic03400
]
INQ41_10875 (recQ)
Enzymes [BR:
lcic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
INQ41_10875 (recQ)
Messenger RNA biogenesis [BR:
lcic03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
INQ41_10875 (recQ)
DNA repair and recombination proteins [BR:
lcic03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
INQ41_10875 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
Helicase_C
RecQ_Zn_bind
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
QOW19134
UniProt:
A0A7S6UF88
LinkDB
All DBs
Position
2415685..2417511
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AA seq
608 aa
AA seq
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MNDAALDLLRTTFGHPDFRGEQAAIIDCLVKGDDALVLMPTGGGKSLCYQLPAMLREGCG
IVVSPLIALMQDQVEALLQLGVRAAYLNSTLDAATAADVERRLLDGELDLLYVAPERLLS
GRCMNLIDRAHAGGGIALFAIDEAHCVSQWGHDFRREYRELTVLHERWPDVPRIALTATA
DEPTRLEIAERLALEDARQFVSSFDRPNIRYRVAQKDGSGQRALLDFLAGHRGESGIVYA
FSRKRVEKTAEQLCEAGVNALAYHAGMPAEVRAANQRRFLQEDGIVMVATIAFGMGIDKP
DVRFVAHVDLPKSVEGYYQETGRAGRDGQPAEAWLNYGLGDVVNLSMLIKQGDASEERKL
LELRKLDALLGYCESTQCRRQALLGWFAEEHPGNCGNCDNCLQPPESWDGTEVARKALSC
VFRTGQRFGAGHVIDVLRGVPTDKVAQHGHEKLSTWGIGTHLDTRQWSSVFRQLVASGLL
AANHERHGALYLTSKAGPVLKGEQTLRLRRDAPKPAGRRGRTGSAPPPMDLAPEAASRFR
SLRGWRAELAKEQNVPAYVIFHDATLREIAESDPADLDELGRIAGIGTSKLERYGEAVLQ
QLLDCDVA
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacgccgccctcgacctgctccgcaccacctttggacaccccgatttccgcggc
gagcaggccgcgatcattgactgtctggtcaagggcgacgacgccctggtgctgatgccg
accggcggcggcaagtcgttgtgctaccagttgccggcgatgctgcgagagggctgcgga
atcgtggtctcgccgctgatcgcgctgatgcaggaccaggtcgaagcgctgctccagctc
ggcgtgcgcgccgcctacctcaactcgaccctggacgccgccaccgctgccgacgtggag
cgccgcttgctcgacggcgagctggacctgctctacgtcgctcccgagcgcttgctatcg
gggcgctgcatgaacctcatcgaccgcgcccatgccggcggcggcatcgccctgttcgcc
attgatgaggcgcattgcgtgtcccagtgggggcatgatttccgccgcgagtaccgcgag
ctgaccgtgctccacgagcgctggcccgacgtgccgcgcatcgccctgaccgccaccgcc
gacgagccgacccggctggagattgccgagcgcctggcgctggaggatgcacgccagttc
gtcagctccttcgaccgtcccaacatccgctaccgggtggcgcagaaggatggcagcggc
cagcgcgccctactcgacttccttgccggccaccgcggcgagagcggcatcgtctatgcc
ttctcgcgcaagcgcgtggagaaaaccgccgaacaactgtgcgaggccggcgtcaacgcg
ctcgcctaccacgccggaatgcccgccgaggtccgtgcggccaaccagcgccgcttcctg
caggaagacggcatcgtgatggtcgccacgatcgccttcggcatgggcatcgacaagccg
gacgtgcgctttgtcgcccacgtcgacctgcccaagtcggtcgagggctactaccaggag
accggtcgcgccggtcgcgatggccagcccgccgaggcctggctcaattacgggctgggc
gacgtggtcaacctgagcatgctgatcaagcagggcgatgccagcgaggagcgcaagctg
ctggagctgcgcaagctcgacgcgctgctgggctactgcgagtccacccaatgccggcga
caggcgctgctgggctggttcgctgaggagcatcccggcaactgcggcaactgcgacaac
tgcctgcagccgccggagagctgggacggcaccgaggtcgcgcgcaaggcgctgtcgtgc
gtgttccgcactggccagcggttcggcgcggggcacgtcattgatgtgctgcgcggcgtg
ccaaccgacaaggtcgcccagcacggccacgagaaactgagcacctggggcatcggcacc
catctcgacacacgccagtggagcagcgtgttccgccagctggtcgcatccggcctgctg
gcggccaatcacgagcgccacggcgccctgtacctgaccagcaaggccggaccggtgctg
aagggcgaacagaccctgcgcctgcgccgcgatgcgcccaagccggccggccgacgcggg
cgcacgggctccgcgccgccaccgatggacctggcgcccgaagcggccagccgtttccgt
tccctgcgcggctggcgcgcggaattggccaaggagcagaacgtgccggcgtacgtgatc
ttccacgacgccaccctgcgcgaaatcgcggaaagcgacccggccgacctcgacgaactg
ggccgcattgccggtattggtaccagcaagctggagcgttacggcgaggcggtgctgcag
caactattggactgcgacgtggcctga
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