Leptospira cinconiae: AB3N61_10355
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Entry
AB3N61_10355 CDS
T10766
Symbol
whiG
Name
(GenBank) RNA polymerase sigma factor WhiG
KO
K02405
RNA polymerase sigma factor FliA
Organism
lcin Leptospira cinconiae
Pathway
lcin02020
Two-component system
lcin02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
lcin00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AB3N61_10355 (whiG)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
AB3N61_10355 (whiG)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lcin03021
]
AB3N61_10355 (whiG)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
lcin02035
]
AB3N61_10355 (whiG)
Transcription machinery [BR:
lcin03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AB3N61_10355 (whiG)
Bacterial motility proteins [BR:
lcin02035
]
Flagellar system
Flagellar assembly proteins
Stator
AB3N61_10355 (whiG)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
UPF0122
Sigma70_r3
HTH_23
EncFtn-like
Sigma70_ECF
SinI
Motif
Other DBs
NCBI-ProteinID:
XDD56673
LinkDB
All DBs
Position
1:complement(2253620..2254420)
Genome browser
AA seq
266 aa
AA seq
DB search
MSKLFEKYNNTDETELWKSYRDSKDQNIRSYLVEKYSPLVKHVAGRIAIGMPQNVEFDDL
VSYGVFGLLDAIEKFDPERQIKFKTYAMTRIRGSIFDELRSIDWIPRSIRQKAKQLEQII
GMLENKEGAHVEDEAIAKEMGISVEEFNSLLTKISGTSLVSLNDIWFLGDENDEVSFMET
LESPMNMNPDTIIEKEEIKNVIVEAIKTLPDKEKKVIVLYYYEDLTLKEIGEVLEVTESR
ISQLHTRAVARLRSKLGKVKSVISKK
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaacttttcgaaaaatacaataatacggatgaaaccgagctttggaagtcctat
agagactctaaagaccagaatattcgcagttatcttgtagaaaaatactctcctctagtc
aaacatgtggccggtcgtattgcgatcggtatgcctcaaaacgttgagttcgatgatctt
gtttcgtacggtgtatttggtcttctagatgcgatcgaaaaattcgatccggaaagacag
atcaaatttaaaacctatgcgatgacccggatccgaggttctatcttcgacgaacttcgt
tccatcgactggatccctcgctccattcgccaaaaagcgaaacagttggagcaaattatc
gggatgctcgagaacaaagaaggcgctcatgttgaggatgaagcgatcgcaaaagaaatg
gggatctccgtcgaggagttcaactcgcttcttactaagatcagcggtacctcactcgtc
tctttaaatgatatttggttccttggcgatgagaacgacgaggtttctttcatggagacg
ttagaatctccgatgaatatgaacccggacaccatcatcgaaaaagaagagatcaaaaac
gtgatcgtggaagcgatcaaaacccttccggacaaagaaaaaaaagtaatcgttctttat
tattacgaggatctaaccttaaaggagatcggagaagtattagaagtaaccgaatccagg
atttcccaacttcatacgagagccgtggcaagacttcgtagtaaattaggaaaggtgaaa
tcggttattagtaaaaagtaa
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