Leptospira cinconiae: AB3N61_13605
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Entry
AB3N61_13605 CDS
T10766
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
lcin Leptospira cinconiae
Pathway
lcin03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lcin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AB3N61_13605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcin03019
]
AB3N61_13605
03400 DNA repair and recombination proteins [BR:
lcin03400
]
AB3N61_13605
Enzymes [BR:
lcin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AB3N61_13605
Messenger RNA biogenesis [BR:
lcin03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AB3N61_13605
DNA repair and recombination proteins [BR:
lcin03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AB3N61_13605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
RQC
ResIII
Cas3-like_C_2
Helicase_C_2
HHH
AAA_30
Motif
Other DBs
NCBI-ProteinID:
XDD59636
LinkDB
All DBs
Position
1:2976452..2978284
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AA seq
610 aa
AA seq
DB search
MEDWKKILHTHFGFSQFRQGQWEAVQALLEKKDVLAILPTGAGKSLIYQLPSFAESDSLT
VVISPLIALMKDQVDGLKARGIQAAYCNSTQDDLEQVRVLSSAATGKIRILYISPERAVS
RSFLNLLPKLPVSLMAVDEAHCVSQWGHDFRPEYRKLHTLRSYLQGATPWVALTATATDR
VKKDISDSLGLKDPLHVQGTYARENLKFSVVYPDSEREKENLLLEILEKGNFHRSTSGKV
IIYCSTRAKVDEIFELLRKSGYKVGKYHAGRTDSSREKAQEGYSSGKTNILVATNAFGMG
LDSPNVRLVLHYQVPSSLESYYQEAGRAGRDGKNSDCVLFFLPGDLSVQSFLLSKEANYK
GGETLLSHVKSYVSSPDCRQKILCEYFGEKISNCGSCDTCADSTTSHTARLAYTERERLK
AEKKKEKESHIFDPDEIESVEGLLSEYPAKFGKKIIAGTLRGAKSKDILRRRLDKSKYYS
SLKHVPEESILKLLEDWQRTKKLSVKGDKYPKIYLTAFGKPKISNEDPEKPRKKAQLTGD
KLILNELKNFRDRIARRNKWKKFMVLQNPVLARIASQKPENMDDLMAIKGMGEAKVRQYG
REILAILEKF
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atagaggattggaaaaagatcctacatacccatttcggattttcccaattcaggcaaggc
caatgggaggcagtccaagcattattggaaaaaaaggatgtgctcgccattcttcctaca
ggcgccggaaaatcactcatctatcaattaccttccttcgcagagtcagactcccttacc
gtagtaatttctccgttgatcgcccttatgaaagatcaagtggacggtttaaaagcgaga
ggtatacaagcagcctattgtaattccactcaagacgatctggaacaagtcagggtttta
tcttccgcagcaaccggaaaaattagaatattatatatttctcccgaacgagctgtctct
cgctctttcttaaatctgttgccgaaacttccggtaagtttaatggcggtggatgaggca
cattgtgtttcccaatggggacatgattttcgtccagaatacagaaaactgcatacatta
cgttcctatttgcaaggagcaactccatgggtggcactgaccgcgaccgcaacagaccgg
gttaaaaaagatatctcggacagtttaggattaaaagacccattacatgtgcaaggcacc
tatgccagagaaaatctaaaattttcggtagtatatcccgactcggaacgagaaaaggag
aatctacttttagaaatattagaaaaagggaattttcatagatcgacttcaggtaaggtg
ataatctattgttccactcgtgctaaggtggatgaaatttttgaacttctccgcaaatcc
ggatacaaagtgggaaagtaccacgcaggaaggaccgactccagcagagaaaaagcccaa
gaaggttattcatccggaaaaacgaatatactcgtagctacaaacgctttcggaatggga
ttggatagtccgaatgtaagacttgtcctacactaccaggtaccttcttctttggagagt
tattaccaagaagcgggaagagctggacgagacggtaaaaattcggattgtgtattattt
tttctcccaggcgacttgagcgtccaaagttttcttttatccaaagaagcaaactacaag
ggaggagaaaccttactctctcatgttaaatcttacgtaagttcacccgattgcagacaa
aagatcttatgcgaatatttcggagaaaaaatctccaactgcgggtcctgcgacacctgc
gcggactctacaacttctcataccgctagactagcttatacggaaagagaaagattaaaa
gcggaaaagaagaaggaaaaagaatcccatatcttcgatccagacgagatcgaatcggta
gaaggactcttgtcggaatatcccgcaaagttcggaaaaaagatcatcgcaggcacctta
agaggagcgaaatccaaggatatacttcgcagaagattggataagtccaaatattattct
tctttaaagcacgtgccggaagaatccattctcaaacttttagaagattggcagaggacc
aaaaaactttcggttaagggagataaatatcctaaaatttacctgactgcattcggaaaa
cctaaaatatcaaacgaagatccggaaaaaccccgtaaaaaagcccaacttacgggcgac
aaactcattctaaacgaactaaaaaatttccgagaccggatcgcaaggcgtaataaatgg
aaaaagtttatggttctccaaaatcctgtacttgccaggatcgcctcccaaaaacccgaa
aatatggacgatctaatggcgatcaaaggaatgggggaagcgaaagttaggcaatatgga
agagaaattttagctattttagagaagttttga
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