Leptospira cinconiae: AB3N61_16030
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Entry
AB3N61_16030 CDS
T10766
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
lcin Leptospira cinconiae
Pathway
lcin03030
DNA replication
lcin03430
Mismatch repair
lcin03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lcin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AB3N61_16030 (dnaE)
03430 Mismatch repair
AB3N61_16030 (dnaE)
03440 Homologous recombination
AB3N61_16030 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lcin03032
]
AB3N61_16030 (dnaE)
03400 DNA repair and recombination proteins [BR:
lcin03400
]
AB3N61_16030 (dnaE)
Enzymes [BR:
lcin01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AB3N61_16030 (dnaE)
DNA replication proteins [BR:
lcin03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AB3N61_16030 (dnaE)
DNA repair and recombination proteins [BR:
lcin03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AB3N61_16030 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HHH_3
tRNA_anti_2
HROB
Motif
Other DBs
NCBI-ProteinID:
XDD59651
LinkDB
All DBs
Position
1:3477150..3480671
Genome browser
AA seq
1173 aa
AA seq
DB search
MEDFAHLHLHTTYSMLDGAIRIKELMQHVKELGMSSVAMTDHGNMFGAIEFYNEATKAGI
KPIIGCEFYVSPNRKAETEEFKIADGNAYHLILLAKNEVGYKNLIKLASKSYTEGFYKKA
RIDYDLLDRNSEGLICLTACLAGEVNRKILEGKTPESFQLAGKLNEIFNKEDFYLEIQNH
GIPEQDIVAKGVYDLAQKTGIKLVVTNDSHFLKKDDKEAQDILLRIGMRKTIEDEMEFGF
NQHFYVKSPAEMKALFPEIPQAFYSTLEVRDKVDLKLKFGNYLLPEFAVPEGFDEYGFME
KLVWEGIRQRYPQVTSEIKERVEFELNTIKNMHFAGYFLIVQDYINFAKKTGIPVGPGRG
SAAGSIVAYALGITNVEPLQFNLLFERFLNPDRKDMPDIDTDFCVERREEVINYIRKKYG
EDRVGQIITFGSLGAKAALKDVARVMNLPFEESNRLTSYCPSKPGITIDEALAMSGDLKQ
ASEKDDLNKKIFAIAKRLEGNHRQPGRHAAGVVISPFPLEDVVPLSTVAEKDKPGVRSIV
TQYEKNNLESVGLIKMDILGLKNLTTLNYAIKLVKERRGIDLDLDKIPLDDANTYALLRK
ANTLGIFQLESTGITDLVARSQVSNFDEIVALIALYRPGPMESGMLEEYLERKSGKKPVT
YPHSSCEVILKETFGLTVYQEQVMSISRVVGGYTMGESDMLRKAMAKKKKELMDPLRIKF
IEGAQKQGHAKKFAEELFDQLEKFGGYGFNKSHSVAYALVTYQTAYMKANYPTEYMAALL
AGDHSKTTDIVKYINNAREMGINVLTPDVNESDVSFSVIDDHTIRFGISAMKGVGEGAAE
NIIQARKNLGGFKKITEFMTNIDTRVLNKKILEALVQGGALDSFGYTRKCLFESMDSLVS
FAQKEQERSREGQFSLFGDSGLSYELKLPKDADEWEMEDRLRREKSITGLFLSGHPLDKY
QGHLKSLNSVPIETLDNIKAGNKVEVVGILTSLKIKFTKKKEEFVNFKLEDRTGEIECVA
FPKVYQKFKELIKEDQAVFLKGDLDRIEAGESELRGQIKVNSFEILNEATIEDKMEKALH
IKLGERHRKMPDIIGQLHTLLAAYQGNSQVYFHLISGDEEKKVIRAHNHYSVQPNPELMN
RLVTLLGEDTVFESFGDNVRLYGNNGTKQAVKM
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atggaagactttgcccaccttcatctgcacacaacttactctatgctcgacggggcaatc
cgcatcaaagagctaatgcaacatgtcaaggagcttggtatgagctccgtggcaatgacg
gaccatgggaatatgttcggtgcaatcgaattttacaatgaggcgaccaaagccgggata
aaaccgatcatcggctgcgaattttacgtttctcccaacagaaaggcggaaacggaagaa
tttaagatcgcggacggaaacgcataccatctcattcttctcgctaaaaacgaagtaggt
tacaaaaatctaataaagcttgcaagtaaatcgtataccgaaggtttttataagaaggca
aggatcgactacgatcttctggatagaaatagcgaaggtctaatctgtcttaccgcctgc
ctagcaggagaagtgaaccgcaaaattttagaaggtaaaactcctgaatccttccaactc
gcggggaaactaaacgaaatttttaataaagaagacttctacttagagatccaaaaccac
gggattccggaacaagatattgtcgcgaaaggtgtatacgatctcgctcaaaagacaggg
atcaaattagtagtaacgaacgattctcacttcttaaaaaaagacgataaggaagcccag
gacattcttcttcgtatcggaatgagaaaaacgatcgaagacgaaatggagttcggattc
aaccagcacttctacgtaaaaagccctgcggaaatgaaagcacttttccctgaaatccct
caggcattctattctacattagaagttcgtgataaagtagatcttaaattaaagttcggc
aattatcttctgcctgagtttgctgttccggaaggtttcgacgaatacggttttatggaa
aaactggtttgggaaggaatacgccagcgttatcctcaagttacttccgagatcaaagaa
agagtagaattcgagctaaacacgatcaagaacatgcacttcgcaggctacttcttgatc
gttcaggattatatcaacttcgccaaaaaaaccggtatcccagtcggtccaggaagagga
tccgcagcaggttccatcgtggcttacgcactcgggatcacgaacgtagaacctttacag
ttcaatctactcttcgaaagatttttgaatccggacagaaaggacatgccggatatcgat
acggacttctgcgtggaacgccgagaagaagtgatcaattatatccgcaaaaaatacgga
gaagatagagtcggtcagatcattacattcggttccttgggcgccaaggcagcgctcaag
gacgttgccagagtgatgaatcttcctttcgaagaatcaaatcgactcacaagttattgt
cctagcaaaccaggtatcacaatagacgaagcattggcgatgtccggtgacttgaaacaa
gccagtgaaaaagacgacttaaacaaaaagattttcgcgatcgcaaaacgtttagaaggg
aaccatcggcaaccgggacgccacgctgcgggcgtagtaatctctccttttcccttggaa
gatgtagttccactttccactgttgcggagaaggacaagccgggcgttcgatctatcgtt
acccaatacgaaaaaaacaatttggaatccgtcggcctgatcaagatggatattttaggt
ctcaaaaacttaacgaccctaaactatgcgatcaaacttgttaaggaaagaagagggatc
gacttagatctggacaaaatccctctggatgatgcaaacacgtacgcattattaagaaaa
gccaatacacttggtatcttccaattagaatccaccggtattacggatcttgtcgctcga
agccaggtctccaattttgacgagatcgtagccttgatcgcactttatcgtcccggtcca
atggaatcagggatgttagaggaatatttggaacgtaagagtggcaaaaaaccggtcact
tatccacattcttcttgcgaagtaattttaaaggaaactttcggactcaccgtataccaa
gagcaggtgatgagtatctcccgagttgtgggaggatacacaatgggcgaatcggatatg
ctccgaaaagccatggcaaaaaagaaaaaagaactcatggatccgttgcggatcaagttc
atcgaaggcgcgcaaaaacaaggccacgcaaaaaaattcgcagaagaactattcgaccag
ttggaaaaattcggaggatacggatttaacaaatcgcactcagtagcgtacgcgttagtc
acctaccaaaccgcatatatgaaggcaaattatccgaccgagtacatggctgcattactc
gcaggagatcattccaaaacgaccgacattgtaaaatatatcaataatgctcgcgaaatg
gggatcaacgttttgactccggacgtaaacgagtccgatgtatccttctccgtaatcgat
gaccatacgattcgattcgggatctctgcaatgaaaggtgtaggagagggtgcggcagaa
aatataatccaagcaagaaagaacctcggaggtttcaaaaagatcaccgagtttatgacc
aatatagatactcgagtactgaacaaaaagatactcgaagcattggtacaaggtggcgcc
ttagattctttcggctacactcgaaaatgtctattcgagtccatggacagtctggtttcc
ttcgcacaaaaagaacaggaaagatctagagaaggtcaattctcccttttcggagacagc
ggcctcagctatgaattaaaactccctaaagacgcagacgaatgggaaatggaagatagg
ctcagaagagaaaaatcgatcaccggtctttttctttcagggcatcctttggacaaatac
caaggtcacttaaaaagtctgaactccgttccgatcgaaaccttggacaatatcaaagca
ggtaataaagtagaagttgtagggattcttacttctttaaagatcaaattcactaaaaaa
aaggaagaattcgtaaactttaagctggaggatcgcacgggagaaatagaatgtgtggcc
tttcctaaagtgtaccaaaagttcaaagaactcatcaaagaagaccaagcagtattccta
aaaggagatctagacaggatagaagccggagaatccgaactcagggggcagatcaaagta
aacagctttgagatcttgaacgaagcaaccattgaagacaagatggaaaaagcgcttcac
atcaagttaggagagcgccatagaaaaatgccggatatcatcggtcagctgcatacttta
ctcgctgcataccaagggaactcccaagtttatttccatctaatctcaggagacgaagag
aagaaggtgatccgcgctcataatcattactcagtgcagccgaatcctgaattgatgaat
cgattggttactttattgggagaagataccgttttcgaaagtttcggagacaatgtcaga
ctctatggaaacaatgggaccaaacaagcggttaagatgtaa
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