Legionella cherrii: NCTC11976_00315
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Entry
NCTC11976_00315 CDS
T06506
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
lcj
Legionella cherrii
Brite
KEGG Orthology (KO) [BR:
lcj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lcj03016
]
NCTC11976_00315 (truB)
Enzymes [BR:
lcj01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
NCTC11976_00315 (truB)
Transfer RNA biogenesis [BR:
lcj03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
NCTC11976_00315 (truB)
Prokaryotic type
NCTC11976_00315 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
Pus10_C
PUA_3
Motif
Other DBs
NCBI-ProteinID:
VEB33334
LinkDB
All DBs
Position
1:complement(361273..362175)
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AA seq
300 aa
AA seq
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MKANKSLAIDGILLLNKPEGMTSNTALQKAKRLLGAQKAGHTGSLDPLATGMLPLCFGEA
TKVCQFLLDADKCYQTTGLLGVKTNTADATGEVTARVDGFTISEAQLLDVLEQHTGHIKQ
IPSMFSALKHNGTPLYRLAREGINIERKAREILISNLQLTAFDGVHFSLTVTCSKGTYIR
NLVEDIGDVLGVGAHVTRLHRVYTSGLDNMPMYSLDALEAMSVSERMNCLIPMDRAVNHL
EQVTLLDDEVVTIRQGRTVLNKIDVEVADCVRLYDKNAQFIGLGERNTQGDIKAKRLLSF
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcgaataaatctttagcaatagatggaattttattgctgaacaaaccggaagga
atgacctctaatacagccttacagaaagcaaaaagactgctaggggcgcaaaaagcagga
catacgggaagtttagatccattagctactggtatgttacccctttgtttcggtgaagcg
acgaaggtatgtcagtttttacttgatgcagataaatgttaccaaactacgggtctgctt
ggtgttaaaacgaatactgctgatgctacaggagaagtaactgcgcgtgtggatggattt
actatttctgaggcgcaattattggatgtattggagcaacatactggtcatataaagcag
attccttcgatgttttccgctttaaaacacaatgggacccctctttatcgtttggctcga
gaagggattaatattgagcggaaagcacgagagatcctgattagcaatttacagcttact
gcttttgatggagttcacttctccttaacagtgacttgtagcaaaggaacatatattcgt
aacttagttgaggatataggtgatgttttaggtgtaggagctcatgtgactcggttgcat
agagtttatacatcaggtttggataatatgcccatgtattcgctcgatgcattagaggca
atgtctgtgtccgaaagaatgaattgcttaattcctatggatagagcagtgaatcattta
gagcaagttactcttttggatgacgaggtagttactatccgtcaaggcagaacagtacta
aataaaatagatgttgaagtagctgattgtgtacgtctttatgacaagaatgcacaattt
attgggttaggtgaacgcaatacacaaggtgatattaaagcgaaacgattgctttctttt
tag
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