Legionella cherrii: NCTC11976_00966
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Entry
NCTC11976_00966 CDS
T06506
Symbol
pipB2
Name
(GenBank) Type III effector pipB2
Organism
lcj
Legionella cherrii
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Gene cluster
GFIT
Motif
Pfam:
DUF2169
Pentapeptide_4
Pentapeptide
Pentapeptide_3
Motif
Other DBs
NCBI-ProteinID:
VEB34685
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Position
1:1096221..1098887
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AA seq
888 aa
AA seq
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MKIFKEKSHTVITFNYRHQGKSKLAITIMAMFSFAKQNQFLSYADFWRVAKKTFNFNQGE
FIDLHMAKQRAEFLVKGSCYSYDSETRQSFVKIILDNLEKQLTVWGDRRWIKDDTRYHLS
QPNTFDKIPITLNNAYGGIGHALNPDGRGLAPMDLITDINLPNVELPGQSIKQPTDTPVP
ALLLPHSPTCTQQLSKFGTIDNDWLRNESPYYPQDIDWLYFNLAPADQQREHFFKGDETF
SCIHMHPEKKIINGQLPGVRLRCFYKRIGSIDRLSELNVNLDTLWLLPDQEKGILIWHGI
IDTQDIAANDIEFIYSANEILAEAPKDIDFYANLRSKPKEAIPRKARSDSSTTNQSSLRG
MGFNLEAEINEIAEHWFPERKKFLEQNEALKIFQGKTPAESLMAIERYYKNRNQAFPAHA
SVKNILRTEAQTENRPYGGNRHGRQFLDFLKKQITNRTSSTSSPSEALGRIEKLEQQIEY
LDKLSAITQFRSGAPGKSTHSREEVVAGFKQGKNFSGENLAGIDLSDLDLSGINLSGCNL
SECNLTRTRLTQANLSMATLFHANLSETHLANANLIHVLIKNASLDGANFSECALQHALI
EDCSGKKCNFANAILNQVHFKKCHLSKGHFVGIKANFLDIVDSTFEESDFSEARMQFANV
HQGSWSTINFTKADLSRALFAGIQLSEVVGNNLSAPHLSLTNCSIEKLVLNNSQCERLSC
KGSTISESTFSCSALTGFNLLNAKVAQSRFINCNLTQIRGNELTKISTSHFEQCNLSNSA
LLGGHYEELALSDSTLDASQLVKNSWKKASFRKCSAKKFRFVNSNIDSCSFQDINFFQGI
FHSSTFENTEFNHCNLYSIAFTDCQRKEVTIQDCLVKNIALHEEEQSS
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atgaagatatttaaagaaaaatcacacaccgtaatcaccttcaattaccgacatcagggc
aaatcaaaattagccattacgatcatggccatgttttctttcgcaaagcaaaatcaattc
ctcagttatgctgatttttggcgtgtcgccaaaaaaacttttaattttaatcaaggcgaa
tttattgatttgcatatggcaaagcaaagagcggaatttttggttaaaggctcttgctac
agctatgatagtgaaactcgccaaagttttgtgaaaatcatattagataatctggaaaaa
caacttactgtatggggcgacagacgatggataaaagacgatacacgctaccatttatct
caacctaataccttcgacaaaataccgattactttaaacaatgcttatggtggtattggt
catgcactcaatcctgatgggagaggactcgcgcctatggatttgattactgacatcaat
ttgcctaatgtggaattacctgggcaatcgataaaacagccaaccgatacccctgtgcct
gcattattattgcctcactcaccaacctgcacgcaacaactgagcaaattcggaacgatt
gataacgattggctacgcaatgaaagtccttactatccccaagatattgattggctctat
tttaatctcgccccagcagatcaacaaagagaacatttttttaaaggggatgagacgttt
tcgtgtatccatatgcatcccgagaaaaaaatcatcaatggtcaattgcctggggtgcgc
ctacgctgtttttataaacggattggtagcatcgaccgcctgagcgaactcaatgtgaat
ctggataccctctggctactgcctgatcaagaaaaaggaatacttatttggcatggcatc
atcgatacacaagatattgctgctaatgatattgagtttatttatagtgcaaatgaaatt
ttggccgaagcacctaaggatatcgatttttatgcgaacctgcgcagcaaacctaaagag
gcaattccaagaaaagcacgcagcgattccagtactacgaatcaatcctctctgaggggg
atgggttttaatttagaggcggaaataaatgaaatagcagagcattggtttccagaaagg
aaaaaatttttggagcaaaacgaagcgctcaagatatttcagggaaaaacgccggcagag
tctttaatggcaatagagcgctattataaaaatcgcaaccaagcatttccagcacacgct
tcagttaaaaatattctcaggaccgaagcacagactgaaaacaggccttatggagggaat
cgacacgggcgtcagtttctggactttcttaaaaaacagattacgaatagaacctcctca
acatcatcaccctccgaagcgttgggtcggattgaaaagttggaacaacagattgaatac
ctggataaactcagtgcgataactcaatttcgatcaggggcacctggaaaatcaacacat
tcacgcgaggaagttgtggcgggttttaaacagggaaaaaatttttctggagaaaatttg
gcagggattgatttatccgatttggatttatcagggattaatttatccgggtgtaattta
agcgaatgtaatttgacccgtacccgattaactcaagccaatttatcgatggcaacatta
ttccatgctaatttatctgagacacacttggctaatgccaatttaatccacgtgttaata
aaaaatgcttctttagatggagcaaatttttcagaatgtgctctgcaacatgcattgatt
gaagactgttccggtaaaaaatgtaacttcgcaaatgctattttaaatcaagtacatttt
aagaaatgccatttgagtaagggacactttgttggcataaaagctaattttcttgatatt
gtagacagtacatttgaggagagtgatttttctgaagcgagaatgcaatttgcgaacgtt
catcaagggagttggagcacgataaatttcaccaaagcagatttgtctcgcgcgcttttt
gcaggcattcaattatccgaggtggtcgggaataatttaagcgccccccatctctcgcta
actaattgttctattgagaagctcgttttgaataacagtcagtgtgagcgccttagttgt
aaagggtcaaccatttctgagagtactttttcttgtagtgcattaaccggattcaatttg
ctgaacgccaaagtggcacaaagccgtttcatcaattgcaacctgactcaaattcgtggc
aatgaactgaccaaaatatcaacgagtcattttgaacagtgcaatctgagcaattcggca
ttactcggcggtcattatgaagagcttgctttgagtgattccaccctggatgcatctcag
ctggtgaaaaactcctggaaaaaagccagtttccgcaaatgcagtgcaaaaaaattcagg
tttgtgaattcaaacattgattcgtgttcgttccaagacatcaatttctttcaaggtata
ttccatagctcaacttttgaaaatactgaatttaatcattgtaatttatacagtattgcg
ttcaccgattgccaaagaaaggaggtaacaattcaggattgcctcgtgaaaaatattgct
ttgcatgaggaggagcagtcctcatga
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