Legionella cherrii: NCTC11976_01026
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Entry
NCTC11976_01026 CDS
T06506
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
lcj
Legionella cherrii
Brite
KEGG Orthology (KO) [BR:
lcj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lcj03016
]
NCTC11976_01026
Enzymes [BR:
lcj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
NCTC11976_01026
Transfer RNA biogenesis [BR:
lcj03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
NCTC11976_01026
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
SHOCT_2
Motif
Other DBs
NCBI-ProteinID:
VEB34805
LinkDB
All DBs
Position
1:1160414..1160734
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AA seq
106 aa
AA seq
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MHTLRIFFAITFPKKIQIKLSNCLKPLQETILSDYMRWVHVEKMHITLQFLGNLPQEQLI
SVTEYVQAAIKNLPPFQLELGQLEWFPTVRRPKVLSLTVSTTSCFS
NT seq
321 nt
NT seq
+upstream
nt +downstream
nt
atgcatacgctaaggattttttttgcaattacctttccaaagaaaatacaaattaaatta
tccaattgcctaaagccgttgcaagagaccatcctatcggattatatgcgttgggtccat
gttgaaaaaatgcatattactttacaatttttaggtaatttaccacaagaacagctcata
tctgtgacggaatatgtgcaggcagcaataaaaaacctaccgccatttcaacttgaattg
gggcagttggagtggtttccaacggtacgacgtcctaaagttctttcgttaacagtttca
accacaagctgctttagctag
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