Legionella cherrii: NCTC11976_01119
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Entry
NCTC11976_01119 CDS
T06506
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase alpha chain
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
lcj
Legionella cherrii
Pathway
lcj03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lcj00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NCTC11976_01119 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lcj03021
]
NCTC11976_01119 (rpoA)
03400 DNA repair and recombination proteins [BR:
lcj03400
]
NCTC11976_01119 (rpoA)
Enzymes [BR:
lcj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NCTC11976_01119 (rpoA)
Transcription machinery [BR:
lcj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
NCTC11976_01119 (rpoA)
DNA repair and recombination proteins [BR:
lcj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
NCTC11976_01119 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
VEB34972
LinkDB
All DBs
Position
1:1243286..1244278
Genome browser
AA seq
330 aa
AA seq
DB search
MYTEINEMLTPNVLKVQAESPYKAKIVLEPLERGFGHTLGNALRRILLSSMPGSAITEVS
IDGVLHEYSTIEGVQEDVVDILLNLKLVATKMTVGEEAIVTLSKQGPCQVTAGDIQLTHG
LEIINPELVIANLNEKGKLNMTLKVERGIGFHSTDSFIRHFDDEVERKSVGKLKIDNSFS
PVKKVAYYVDSARVENRTDLDKLTIELETNGTIDAEESIRISASILQRQLHAFVDMKFEE
SRADNKERNDFDPILLRSVDDLELTVRSANCLKAENIHYIGDLVQRTENELLKTPNLGKK
SLTEIKDVLASRSLSLGMKLENWPPANLGE
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgtatactgaaatcaatgaaatgttgacacctaatgttcttaaggtccaggcagaatcg
ccctataaagctaaaatagttttagagcctttggagcgtggctttggtcatactctcggc
aatgctttgagacgtatcttactatcatcaatgccgggaagtgcgattaccgaagtttca
attgatggtgttctacatgaatacagcacaattgaaggtgtacaggaagatgtcgtggac
atcttactgaacctgaagttagttgcgacaaaaatgacagtcggtgaagaagcgattgta
acactaagcaagcaaggtccttgtcaagttacagctggagacattcaattgactcatgga
ttagaaattatcaatccagagttggtcattgctaatttgaatgaaaaaggcaaattaaat
atgacattgaaagttgaacgaggaattggtttccacagtactgattcatttattagacat
ttcgatgatgaagtagaaagaaaatcagttgggaaacttaaaattgataatagtttctct
ccagttaaaaaagtggcttattatgtcgatagtgctcgtgtagaaaatcgaactgacctc
gataagttaactattgagttagaaactaatgggactattgatgctgaagaatcaatacgt
atttctgctagtattcttcaaagacaacttcatgcttttgtagacatgaaatttgaagag
tcacgcgcagataataaagaacgcaatgattttgatcctattctactacgttctgtcgat
gatttagagttaactgttcgttctgcaaattgtttgaaagcagaaaatattcattatata
ggcgatttagtacaaagaactgaaaatgaactcttaaaaactcctaaccttggtaagaaa
tctttaaccgaaattaaggatgttttagcttcacgttcattatcgctgggtatgaaactt
gagaattggccgccagcaaatcttggcgaataa
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