Legionella cherrii: NCTC11976_01493
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Entry
NCTC11976_01493 CDS
T06506
Symbol
alkA
Name
(GenBank) DNA-3-methyladenine glycosylase
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
lcj
Legionella cherrii
Pathway
lcj03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lcj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NCTC11976_01493 (alkA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lcj03400
]
NCTC11976_01493 (alkA)
Enzymes [BR:
lcj01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
NCTC11976_01493 (alkA)
DNA repair and recombination proteins [BR:
lcj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NCTC11976_01493 (alkA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
AlkA_N
DUF2420
Motif
Other DBs
NCBI-ProteinID:
VEB35705
LinkDB
All DBs
Position
1:1642327..1643238
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AA seq
303 aa
AA seq
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METFFTLHPVAPFRLDYTALALRRRCKNNVDLWDGQRYTRLLVMENVPVKVVVEQNKNFN
ESELVLSIKGEGLEVYQNQIVNEVETILGLKRELHDFYHIAQRDAQLNPLVLQFKGLKPP
RFPSVFEALVNAISCQQISLDAGLQIQNRLAEFLSLRIKEEEQLFYAFPRPNEVANCSVP
ELKKIGYSTSKSETLIRLATAIMQDEFIFGTLENKSNDAIIDFLCDFKGIGRWTAEYVLL
RGLGRIDIFPGDDLGAQNNLYQFLHLDQKPDYKKIAEITAKWHPYAGLIYFHLLLKRMHE
KQL
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atggagactttttttaccttacatccagtagccccgtttcggttggattatactgcttta
gctttacggagaagatgtaaaaataatgtcgatctttgggatggccaacgttacacaaga
ctattggttatggagaacgtgcccgttaaagtagtggttgaacaaaataaaaatttcaac
gaatccgagctggtattatcgattaaaggtgagggcttagaagtctatcaaaatcaaatt
gtaaatgaagtagagaccatactcgggttgaaacgtgagttgcatgatttttatcatatc
gcacagcgcgatgcccaattaaaccctcttgtcctgcaatttaaagggctcaaaccacct
cgatttccttctgtttttgaggcgcttgttaatgcaatttcttgtcaacaaatctctttg
gacgccggattgcaaattcaaaatcgattggctgaatttctgagcctaaggattaaagaa
gaagagcagctattttatgcgtttccaagacccaacgaagtggcaaactgctcggttcct
gaattaaagaaaataggctatagcacttctaaaagtgagacccttatacgattagcaaca
gcaatcatgcaagatgagtttatttttggaaccctggaaaacaaatcaaatgatgcgatc
atcgattttttatgtgattttaaaggcataggtcgctggactgcggaatacgttttatta
cgtggtttaggacgaattgatattttccctggtgatgatcttggcgcacagaataattta
tatcaatttttgcatcttgatcagaaaccggattataagaaaatcgcagaaatcaccgca
aaatggcatccctacgcaggtttgatttatttccatttgttattaaagcgcatgcatgaa
aagcaactctag
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