Legionella cherrii: NCTC11976_01691
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Entry
NCTC11976_01691 CDS
T06506
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
lcj
Legionella cherrii
Pathway
lcj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lcj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NCTC11976_01691 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcj03019
]
NCTC11976_01691 (recQ)
03400 DNA repair and recombination proteins [BR:
lcj03400
]
NCTC11976_01691 (recQ)
Enzymes [BR:
lcj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NCTC11976_01691 (recQ)
Messenger RNA biogenesis [BR:
lcj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NCTC11976_01691 (recQ)
DNA repair and recombination proteins [BR:
lcj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NCTC11976_01691 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
DUF763
HHH
HEM4
Motif
Other DBs
NCBI-ProteinID:
VEB36403
LinkDB
All DBs
Position
1:complement(1897122..1898942)
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AA seq
606 aa
AA seq
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METLAAPITRNQNSLAVLKEYFGFDSFRTPQEDIINDVIAGHDVLVLMPTGGGKSLCYQI
PAIVRPGIGIVVSPLIALMEDQVTALRLQGIRAAYYNSSLTSEEAKNVLMQLHHDELDLL
YIAPERLINASFLERLKECHIALFAIDEAHCISQWGHDFRPEYAALGVLKTHFPNIPIIA
LTATADKQTRQDIVKQLNYTPKKYIASFNRPNIHYKVVHKTNAVRQLNQFLQTVEQQSGI
IYCGTRTGVENLAKKLQEMGFKARAYHAGLPHKERREVQMLFRYDRIDIVVATIAFGMGI
DKPNVRFVVHHDLPKNIEGYYQETGRAGRDGLPAQALLLYDAADSARLRSWIINNPLDEQ
RRVENNKLNHMLAFAEASHCRRQILLRYFDEVCDTECQYCDVCDNPPTTSDATEDARKLL
SCIYRLRQNYGLTHTIDVLRGSSSDKIKQYGHEQLSTFGIGKDKSAQYWKQLAWQLIHKE
YCIQDMNHFNVLKLTPKAIPLLKGEEKISLTLANTDIKSNKKKTKERRSIQTTNSPLFEL
LRILRRKLADEENKPPFMIFSDATLHAMAETKPRNQEELLAVPGVGQHKLAHYGSQFLNA
LNEYNE
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atggaaactcttgcggcacctataactcgcaatcaaaactcgcttgctgtactcaaagag
tactttggtttcgattcgtttagaacacctcaggaagacattattaatgatgttattgct
ggacacgatgttcttgttttaatgcccaccggcggtggaaaatccctatgttatcagatc
ccagctatagtaagaccaggaataggcatcgttgtttcgccattaattgctttaatggag
gatcaggtaactgccttaagattacaaggaattcgcgctgcttattataattcctcttta
accagtgaagaggcgaaaaatgtattgatgcaattacatcatgatgaattggatttattg
tacattgctcctgagcgcctaattaacgcatcgtttttagaacgattaaaagaatgccat
atcgcactttttgcgattgacgaagctcattgtatctctcagtggggtcatgattttcgt
cctgaatatgcagctctaggagttttaaaaacccattttcctaatatcccaattattgct
ttaactgcaactgcggacaaacaaacacgtcaggatatagttaaacaattaaattatacc
cctaaaaaatacattgcctcatttaacagaccgaatattcattataaagttgttcataaa
accaatgccgtcaggcaattaaatcagtttttacaaacagtggaacaacaatcgggaatt
atttactgtggaacccgtacgggcgtagaaaatcttgcaaaaaaactacaagaaatgggg
tttaaagcccgtgcttatcatgccggactgccgcacaaagaacgccgagaagtacaaatg
ttattcaggtatgatcgtattgacatcgttgttgctacgattgcttttgggatggggatt
gataaacctaatgttcgttttgtcgttcatcacgatctacctaaaaatattgaaggatac
tatcaagaaaccgggcgtgcgggacgtgatggcctaccagcacaagcacttttactttat
gatgctgcagatagtgctcgattgcgctcctggattataaacaatccgcttgatgaacaa
agacgagtggaaaacaataagctcaaccacatgcttgcttttgctgaagcatcgcattgc
cgtcgccaaattttattgcgttattttgatgaagtatgtgatacagaatgccaatattgt
gatgtatgtgataatccaccaacaacctctgatgcaacagaggatgcgcgaaaactcttg
tcttgtatttatcgtttacggcaaaattatggtttaacccataccatagatgtattacgt
ggcagttcttcggataaaataaaacaatatggtcatgaacaactcagtacttttgggatt
ggtaaagataagtcagcccaatactggaaacagctggcctggcaacttattcataaagag
tattgtatacaggatatgaaccattttaatgttcttaaattaactcctaaagcaattcct
ttactaaagggtgaagaaaaaatatcattgaccctggccaataccgatataaaaagcaat
aaaaagaaaaccaaagaacggcgttcaattcagacaacaaacagcccgctgtttgaactg
ctgcgaattttaagacgtaaactggccgatgaagagaacaaaccaccttttatgatcttc
agcgatgcaaccctccatgcaatggcagagaccaaacctcgaaaccaggaagagttactc
gcagtacctggtgtaggtcaacacaaactggcacactatggaagccagttcctaaacgca
ttgaacgaatataatgaatag
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