Legionella cherrii: NCTC11976_01862
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Entry
NCTC11976_01862 CDS
T06506
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lcj
Legionella cherrii
Pathway
lcj03420
Nucleotide excision repair
lcj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lcj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NCTC11976_01862 (uvrD)
03430 Mismatch repair
NCTC11976_01862 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lcj03400
]
NCTC11976_01862 (uvrD)
Enzymes [BR:
lcj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NCTC11976_01862 (uvrD)
DNA repair and recombination proteins [BR:
lcj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NCTC11976_01862 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
NCTC11976_01862 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_12
AAA_11
PAH
Motif
Other DBs
NCBI-ProteinID:
VEB36741
LinkDB
All DBs
Position
1:2119190..2121364
Genome browser
AA seq
724 aa
AA seq
DB search
MTLAAILKGLNERQREAVTSPLGNTLVLAGAGSGKTKVLVSRIAWLIEEEHISPHGILAV
TFTNKAAGEMKARLNSILSTPVLGLWVGTFHGLCHRLLRRHYKEANLPELFHILDSEDQA
RVIKRVIASLNLDPEQWPVKQAQSFINGRKDEGIRPQHVHTLPYGPGKTLLNIYSAYEQA
CQTAGVIDFAELLLRTHELLRDNPEILEHYRQRFQAILVDEFQDTNTIQYAWIRLLAGEH
TAVMAVGDDDQSIYGWRGAKVENIQQFSQDFKNTQIIRLEQNYRSTATILNAANALITHN
NSRMGKDLWTDGATGEKILVYGAFNELEEARFVCERIMMEINQGGSADEIAILYRSNAQS
RVLEEALLRAGIAYRIYGGVRFFDRAEVKDVLAYLRLLVNPHDDSAFDRVVNFPTRGIGE
KTLDDLRHYAKAEQCSLWHAAKTLLQSGEMAQRAGSALSKFIELIEQLHQNTQSMELDEQ
LSVVIQLSGLYAHFSKIKGDKSESRLDNIQELINAAKQFRYEQEEDEEIPLINAFLAHAS
LEAGEMQAGEHERYVHLMTLHAAKGLEFPIVFLVGMEEGVFPGKQSLEEPGRLEEERRLC
YVGMTRAMRKLVLSYAEIRRQYGREEYHRSSRFLRELPQELLNEVRVKAKFQSPVISRNK
PTVMPEAETSGLSLGQSVTHAKFGQGVVLAVEGSGAHTRVQVKFREHGVKWLVLAYANLA
VEAQ
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgactcttgctgcaattcttaaaggactgaatgagcgacaacgtgaagcagttacctct
ccacttggtaatacgctagtcctggctggagcaggaagtggaaaaacgaaagttttggtc
agtcgcatagcctggcttattgaagaagagcatatctcgcctcatggaattttggccgta
acttttaccaataaagctgcgggcgaaatgaaagcacggttaaatagtatcttgagtact
ccggtactgggactatgggtaggaacttttcatggattgtgccatcgtttacttcgtcga
cactataaagaggcgaatttacctgaattatttcatattctggactctgaagatcaggcg
cgggtaatcaagcgcgttattgcctcattgaaccttgatcccgaacaatggccagtgaaa
caggcccagtcctttattaatgggcgtaaagatgagggaatacgacctcaacacgtacat
actttgccttacggacctggtaaaaccttgctcaatatttatagtgcctatgaacaagca
tgtcagactgcaggggtgattgattttgcagagttgttattgcggactcatgagctacta
cgtgataaccccgaaattcttgagcattaccgtcaacgttttcaagccatattagtcgat
gagtttcaagatacgaatacgattcagtatgcatggatacgtcttctcgcaggcgagcat
acggctgttatggcagtgggtgatgatgatcaatccatttatggttggcgtggcgctaag
gttgaaaatattcagcaattttctcaggactttaaaaatacccaaattatccgtttggag
cagaactatcgttccacagcaaccatacttaacgcggcaaatgcactcattacccataat
aattcgaggatggggaaagacttgtggacggatggggcaactggggaaaaaattctagtt
tacggcgcgtttaatgagctggaagaagcgcgctttgtctgcgaacgaattatgatggaa
atcaatcaggggggaagtgctgatgaaattgctattttatatcgttccaatgcccaatcc
agggttttagaggaggcattgctgcgcgcagggattgcctatcgtatttatggtggggtg
cgtttctttgatcgagcagaagtcaaagatgttttagcttatttgcgtttattagttaat
cctcacgatgatagcgcttttgatcgcgtagtcaatttcccaacacgaggtattggtgaa
aagacgcttgacgatttgcgtcattatgcgaaagcagaacaatgctcattgtggcatgcg
gctaagaccttattacaatcgggtgagatggctcagagggcaggttctgcattatcgaag
ttcatcgaattaatagaacaattgcaccaaaatactcaatcaatggagttggatgagcag
ttatctgtagtgattcagctgagtggattgtatgctcatttcagcaaaatcaaaggggat
aagtcggagtctcgccttgataatatccaagaactaatcaatgctgcaaaacaatttcgt
tatgaacaagaggaagatgaggaaatccctttaattaacgcattcttggcacatgcttct
ttggaggctggagaaatgcaggcgggagaacatgagcgttatgttcatttaatgacctta
catgctgctaaggggcttgaattccctatagtatttttagttggaatggaagaaggggtg
ttccctggaaaacagtctttggaagaacctggacgtttagaagaagaacgccgtttatgc
tatgtgggtatgacgcgcgctatgcgaaaattggttttgtcttatgctgaaataagacgt
caatatgggcgagaggagtatcatcggtcttcacgttttttaagggagctgcctcaagaa
ttacttaatgaagttcgtgtcaaggcgaaatttcaatctcctgttatttctcgaaataaa
cccacagtgatgccagaagcagaaacttcgggattgtctttgggacaaagtgtaacccat
gccaagtttggtcagggtgtggtgttggctgttgaggggagtggggcacatacccgtgtt
caggtaaaatttagagaacatggtgttaagtggctggttttagcctatgctaatttagct
gtagaggcacagtga
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