Legionella cherrii: NCTC11976_02009
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Entry
NCTC11976_02009 CDS
T06506
Symbol
holA
Name
(GenBank) DNA polymerase III, delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
lcj
Legionella cherrii
Pathway
lcj03030
DNA replication
lcj03430
Mismatch repair
lcj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lcj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCTC11976_02009 (holA)
03430 Mismatch repair
NCTC11976_02009 (holA)
03440 Homologous recombination
NCTC11976_02009 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lcj03032
]
NCTC11976_02009 (holA)
03400 DNA repair and recombination proteins [BR:
lcj03400
]
NCTC11976_02009 (holA)
Enzymes [BR:
lcj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NCTC11976_02009 (holA)
DNA replication proteins [BR:
lcj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NCTC11976_02009 (holA)
DNA repair and recombination proteins [BR:
lcj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NCTC11976_02009 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delt_C
DNA_pol3_delta
Motif
Other DBs
NCBI-ProteinID:
VEB37035
LinkDB
All DBs
Position
1:complement(2288117..2289142)
Genome browser
AA seq
341 aa
AA seq
DB search
MQIRQQLLAQQVQKKIAPLYIIIGQDNYLLEDSLITIKSAIKRNYNYDEKIISIQSVDDW
SIVKEEANSYSLFSETVLLNIFYDKKSIDTTGKKILSEYLNSVNSRCFIVIRAPNVPAKQ
LQWLSSHEQAILTLAYPLNSEAIKSWIAVQLKKNSMSYDPQVPELIHQYTQGNMLACSQV
IEKIALSCAPNSKVDAQQALEHLSNQCDHDLFELVEACLLGQSDKAIQILRHAANNKTEA
TLVLWIISQEIRLIMQLSYLMEQQIDAQSACSQLKIWPQRVNLYKACCNRLNKTMLQQLH
RYCYSIDERIKSNLNTLVWSSLENAALSLCLGNLIGDVCTA
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatcagacaacaattgcttgctcaacaagtacaaaaaaaaattgcaccgctctac
ataattattgggcaggataattacttgctggaagattctttaataaccataaaatcagca
attaaaagaaattataattatgatgaaaaaatcatatcgatccaatcagtggacgattgg
agtattgtaaaggaagaagcaaacagctactccttattttcagaaacagtactcttaaat
attttctatgataaaaaatcaatagatactactggaaaaaaaattctttctgaatacctt
aattcggtaaattcacgttgctttattgttattagggcgcccaatgtacctgcgaagcaa
ttacaatggttatcttctcatgagcaggccattcttacactagcctacccactgaattcg
gaggcaatcaaaagttggattgccgtacaattaaagaaaaactcgatgagctatgatcct
caggttcctgagttaattcatcaatacacccagggaaatatgctggcttgttcccaagtt
attgaaaaaatagccttatcttgtgctcccaacagtaaagtagatgcacaacaagcatta
gagcatttgtccaatcaatgcgatcatgatctttttgaactcgttgaggcgtgtctgcta
ggtcaaagtgataaagcgattcagattttacgtcatgcagcaaataataagaccgaagcc
actttagttctgtggatcatcagtcaagaaatacgcttaatcatgcaattgtcctattta
atggaacaacaaattgatgctcaaagtgcttgcagtcaacttaaaatttggccccagcgc
gttaatctttataaagcgtgttgtaatcgactcaataagaccatgttacagcaacttcat
cgctactgttattccatagacgaacgaattaaatcaaatctcaatactctagtatggagt
tcccttgaaaatgctgctctatcactctgtctgggaaatttaataggtgacgtatgcaca
gcatag
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