Legionella cherrii: NCTC11976_02367
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Entry
NCTC11976_02367 CDS
T06506
Symbol
recJ
Name
(GenBank) Single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
lcj
Legionella cherrii
Pathway
lcj03410
Base excision repair
lcj03430
Mismatch repair
lcj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lcj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NCTC11976_02367 (recJ)
03430 Mismatch repair
NCTC11976_02367 (recJ)
03440 Homologous recombination
NCTC11976_02367 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lcj03400
]
NCTC11976_02367 (recJ)
DNA repair and recombination proteins [BR:
lcj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
NCTC11976_02367 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
NCTC11976_02367 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
NCTC11976_02367 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Glyco_transf_4
Motif
Other DBs
NCBI-ProteinID:
VEB37735
LinkDB
All DBs
Position
1:complement(2698798..2700540)
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AA seq
580 aa
AA seq
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MLIKQRPRPSHILDLPNVPDVLRRIFANRGIKESCQLDKQLQTLLPFDSFKGIKEACVRL
ESALREQHRILIIGDFDADGATSTALAVTALRAMGAQFVDYLVPNRFEFGYGLTPQIVEV
ASKWKPDLIITVDNGIASVEGVEKANQLGIDVLITDHHLPADTLPAACAIVNPNQPDCKF
PSKSIAGVGVIFYVMLALRRHLVNANWFHEMNITEPNMASFLDLVALGTVADVVGLDQNN
RIMVNQGLSRIRQGQCRVGIRALIEVSGREYARLRESDLGFAIAPRLNAAGRLDDMALGI
ECLITTDQQQARNYCQQLDELNEERKLIETEMKEQAMLALEKLALSTEYTSNHLPIALCL
FDKTWHQGVIGILAGRVKERYHRPVIAFAEVSEHELKGSARSVPDLNIRDVLAAIDKDYP
GLISKFGGHAMAAGLSIHPNSFKVFSEALISEVSKHIDLSQCEGEVLTDGPLQPEELNIE
IAQLIQQAGPWGQQFAEPVFDNVFEVLEQRLVGKNHLKMTLATTQGDQQVDAIAFNIDLK
SWPNHRVKYIHAAYKLDINFYQGRTRLQLLIQAMNAVHQK
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgctaattaaacaacgccccagaccatcacacatactcgatttacctaatgtgcctgat
gtattaaggcgaatatttgcaaacagggggatcaaagaatcttgccaattggataaacaa
ctccaaacattactgccttttgacagctttaagggaatcaaagaggcttgtgtacgttta
gagagcgcattacgtgaacagcatagaattttaatcattggtgattttgatgcagatggt
gcaacttcaaccgcacttgctgttactgctttacgggctatgggagctcaatttgttgat
tatttggttcctaatcggtttgagtttggctatggtttaacacctcaaatcgttgaggtg
gccagtaaatggaagcctgatctcattatcaccgtagataacggtattgctagtgttgag
ggtgtggaaaaagcaaaccagttagggattgatgttttaatcaccgatcatcatttgcct
gcagatactcttcctgctgcctgtgctattgtgaacccaaatcagccagattgtaaattt
cccagtaaatcgattgctggcgtaggggttattttttacgtcatgctggctttgcgtaga
catttggtgaatgccaattggttccatgaaatgaatatcactgaacctaatatggccagt
tttttggatttagttgcattaggcactgtcgctgatgtagtggggctggatcagaataac
cgcattatggtgaatcaaggtctttccagaattcgtcaaggacaatgtcgtgtaggaatt
agggctttgattgaagtgtctggacgtgagtatgcgcgactaagagagtccgatttaggt
tttgctattgcaccaagactcaatgctgcaggaagattggacgatatggctttaggcata
gaatgcttaattactaccgatcagcaacaagccagaaactattgtcaacaactcgatgag
ttaaatgaagaaagaaagttgattgaaactgaaatgaaagagcaagcaatgcttgcattg
gaaaaacttgctttaagtacagaatatacaagtaatcatttacccatcgccttatgcctt
tttgataaaacctggcatcagggggttattggaattttagcgggacgcgtgaaagagcga
tatcatcgacctgttattgcatttgcggaagtcagtgaacatgaattaaaaggatctgca
cggtctgttccggatttaaatattcgagatgtattggcagcaattgataaggattatcca
gggctcatcagtaaatttggtggtcatgccatggctgcaggtctgagtattcatccaaac
tcgtttaaagtctttagtgaagcattaatttctgaagtgagtaagcatattgatttatct
caatgcgaaggggaagtgcttacagatgggccattgcagcctgaagagcttaatattgag
attgctcaattgatccagcaagcgggtccttggggacagcaatttgctgagcctgtattt
gataatgtttttgaagtgcttgagcaacgactggtgggaaaaaatcatttgaaaatgact
ttggcaacaacacagggtgatcaacaggtggatgcgattgcatttaacattgatttaaaa
tcttggccaaaccacagagttaaatacatccatgcggcttataagctggatattaatttt
taccaaggacgcacacgcttacaattacttattcaagcaatgaatgcggtacatcaaaaa
tag
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