Legionella cherrii: NCTC11976_02692
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Entry
NCTC11976_02692 CDS
T06506
Symbol
dnaE_1
Name
(GenBank) DNA polymerase III, alpha chain
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
lcj
Legionella cherrii
Pathway
lcj03030
DNA replication
lcj03430
Mismatch repair
lcj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lcj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCTC11976_02692 (dnaE_1)
03430 Mismatch repair
NCTC11976_02692 (dnaE_1)
03440 Homologous recombination
NCTC11976_02692 (dnaE_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lcj03032
]
NCTC11976_02692 (dnaE_1)
03400 DNA repair and recombination proteins [BR:
lcj03400
]
NCTC11976_02692 (dnaE_1)
Enzymes [BR:
lcj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NCTC11976_02692 (dnaE_1)
DNA replication proteins [BR:
lcj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NCTC11976_02692 (dnaE_1)
DNA repair and recombination proteins [BR:
lcj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NCTC11976_02692 (dnaE_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_finger
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
SSB
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
VEB38355
LinkDB
All DBs
Position
1:complement(3039359..3040954)
Genome browser
AA seq
531 aa
AA seq
DB search
MKELINRLQPDCFEDIIALVALFRPGPLQSGMVDDFIDRKHGRAAVDYPHPDLEPILKPT
YGVILYQEQVMQIAQVLANYTLGAADLLRRAMGKKKPEEMAKQREIFTEGATARGVDEKV
ATHIFDLMEKFAGYGFNKSHSAAYALVAYQTAWLKAHYPAAFMAAVMSSDMDNTDKVVTF
IDECAHMKLTILPPSINHSMYPFTVTDDTTIIYGLGAIKGVGESAIDCITEEREAGGAYS
DLFGFCQRLDLRKVNRRVLEALIKSGAFDDWGVERAMLTASLEKALKVAEKEHQNQSSGQ
FDLFSLLEDESNEQKYVPCKPWSEAQRLEGEREVLGFYLTGHPADQYRREFGDFIVSISQ
LNPSMHKKALICAQIVGIRKIITKRGKKLVILGMDDSTARLDVVVFGELFESVGSTLATG
DMLVIEGEVAHDDYNGGVKMTANNLYDIPTARTKFARCLELRLYPEHQGILASIQALLKA
HVGRCTVQFSYSNEYARAQLSLAPQWQVIPSDELLGLLTNLLGDEHVVMRY
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaattgattaatcgtctgcagccagattgttttgaggacatcatcgcgttagta
gccttatttagaccaggtcctctacaatctggaatggtggatgattttatcgatcgtaag
catgggcgtgcggctgttgattatcctcatcccgatttagaacctattttaaaaccaaca
tacggcgttatcctgtatcaagagcaagtaatgcaaattgcacaggtattagcaaattat
actctaggcgctgcagatttattgcgtcgtgctatgggaaagaaaaagcctgaagaaatg
gcgaaacagcgggagatttttactgagggagcgactgctagaggcgttgatgaaaaggtt
gcaacgcatatttttgatttgatggaaaaatttgcaggctatggatttaataagtcgcat
tctgcagcttatgcactggtcgcatatcaaacagcatggcttaaagcacattatccagcc
gcatttatggctgcggtaatgtcctcagatatggacaacaccgataaagtagtcacattt
attgatgaatgtgctcatatgaaattaactattttacccccctccatcaatcactccatg
tatccttttacggtcactgatgataccaccatcatttatggtttgggggctataaaagga
gtgggggagtctgcaatagattgcatcaccgaagagcgcgaagcgggtggggcttattcc
gatttatttggtttttgtcaacgccttgatctgcgtaaggtgaaccggcgtgtattagaa
gccctgattaaaagtggagcctttgatgattggggtgtagagcgggctatgttgaccgct
tctttggaaaaagcattgaaggtcgcagaaaaagaacaccaaaatcagtccagtggccaa
tttgatttgttttccttattggaggacgagagcaatgagcaaaaatatgttccctgtaaa
ccttggtctgaggcacaacgtcttgagggtgaacgagaagttttggggttttatttaacc
ggacatcccgccgaccaatatcgacgcgaatttggtgattttatcgtttcgatcagtcaa
ttaaatccatccatgcataaaaaagcccttatttgtgcgcaaatcgttggaattcgcaaa
attataacgaaacgtggcaagaaacttgtaattcttgggatggatgattccacggctcga
cttgatgttgttgtatttggcgaactttttgaatcggttggatctaccttggcaactgga
gatatgttggttattgaaggtgaggtagcacatgatgattataatggtggtgtgaaaatg
accgcaaataatctttatgatattccaactgcacgcaccaaatttgctcgatgtcttgaa
ttgcgtttgtatcctgaacatcaggggattttagcctccattcaggccttgttaaaagcg
catgtcggacgttgtacggttcaattttcatatagcaatgagtatgctcgggcacagtta
agtttggcgccacaatggcaggtaattcccagcgatgagttacttggccttttgactaat
cttttaggtgatgagcatgttgtgatgcggtattaa
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