Lichenicola cladoniae: HN018_00440
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Entry
HN018_00440 CDS
T07054
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K10943
two-component system, response regulator FlrC
Organism
lck
Lichenicola cladoniae
Pathway
lck02020
Two-component system
lck02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
lck00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HN018_00440
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
HN018_00440
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
lck02022
]
HN018_00440
02035 Bacterial motility proteins [BR:
lck02035
]
HN018_00440
Two-component system [BR:
lck02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
HN018_00440
Bacterial motility proteins [BR:
lck02035
]
Flagellar system
Flagellar assembly proteins
Others
HN018_00440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_5
AAA_16
Response_reg
AAA_19
AAA
AAA_3
AAA_30
MCM
nSTAND3
SpoVS
AAA_2
AAA_22
AAA_7
Motif
Other DBs
NCBI-ProteinID:
QKE88725
UniProt:
A0A6M8HL18
LinkDB
All DBs
Position
complement(93250..94632)
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AA seq
460 aa
AA seq
DB search
MRVLIIGSLGGELGKAAQIAAARGAQLDQADDVVAGLARLRRDARFKLVLCELGLPIADL
VQGLIRERISVPVIACGAEDDPDAAVRAVRDGAQDFLPLPPDPELIAAMLEAASGESHVL
IARDPVMLATVRAAEQVARSDASVLITGESGTGKEIVARHIHRRSRRAEGPFIALNCAAI
PEHLLESELFGHEKGAFSGAIARRIGRFESAEGGTLLLDEISEMDIRLQAKLLRAIQERE
IDRLGGQTPVRVNVRILATSNRQLAAEAAAGRFREDLYFRLNVVGIEIPPLRARPGDIAV
LAAHYARHYAQANGIEPPLLSEASLHCLVAYSWRGNVRELENIMHRAILLAQGPIIEPAD
LGLPALPGQPKAAALPNQAETLDASRGISGLVGRRMDDVEQALILETLYSTAGNRTHAAT
ILGISIRALRNKLRDYADHGVPVPRPLAGLGAPVNTGVAA
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgtcctgatcatcgggtcgctgggcggtgagcttggcaaggcggcgcaaatcgcg
gccgcaagaggcgcgcagctcgaccaggccgacgatgtcgttgcgggcctggcgcggctg
cgacgcgatgcgcgcttcaagctcgtcctgtgcgaactcgggcttccgattgcggacctg
gtgcagggcctgatccgtgaacgcatcagtgtgccggtgatcgcctgcggcgcggaggac
gaccccgatgcggcggttcgtgcggtacgggacggggcacaggatttcctgccgctaccg
ccggaccccgagctgatcgccgccatgctggaagcggcatccggcgaaagccatgtgctg
atcgcgcgggatccggtgatgctcgcaaccgtccgtgccgccgagcaggttgcccggtcg
gacgcatcggttctgatcaccggtgaatccgggaccggcaaggagatcgtggcccggcat
atccatcgccgttcgcgtcgcgccgaaggtccgttcatcgcgttgaactgtgccgcgatc
ccggagcatctgctggaatccgaactgttcgggcacgagaagggcgccttcagcggtgcc
atcgcccgtcggatcggccggttcgagtcggcggaaggcggcaccttgctgctcgacgag
atcagcgaaatggatatcaggctgcaggccaagttgctgcgggcgatccaggaacgcgag
atcgaccggctcggcggccagaccccggtccgggtcaacgtccgcatcctggcgacaagc
aatcggcaactggccgcggaggctgccgcaggacgcttccgcgaggacctctatttccgc
ctcaatgtcgttggaatcgagatcccgccgctgcgagcacggcccggcgacattgcggtg
ctggccgcccactacgcgcgccattatgcccaggccaacggcatcgagccgccgctgctg
tccgaggcatcgctgcattgcctggtggcatattcctggcgcggcaatgttcgcgaactg
gagaacatcatgcaccgggccattctgctggcccaggggccgatcatcgagcctgcggac
ctcggccttcctgcactgccgggccagccgaaagctgccgccttgccgaaccaggccgag
acgctcgacgcctcgcgcggcatctccggcctggtcggccgtcgcatggacgacgtcgaa
caggcgctgatacttgaaacgctctacagcaccgccggcaaccggacgcacgcggcgacc
attctcggcatctcgatccgcgcgttgcgcaacaagctgcgcgactacgccgatcacggc
gttccggtgccgcgtccgctggccgggctcggcgccccggtcaataccggcgtggcggcc
tga
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