Lichenicola cladoniae: HN018_02160
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Entry
HN018_02160 CDS
T07054
Name
(GenBank) sugar ABC transporter ATP-binding protein
KO
K10558
AI-2 transport system ATP-binding protein
Organism
lck
Lichenicola cladoniae
Pathway
lck02010
ABC transporters
lck02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
lck00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
HN018_02160
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HN018_02160
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lck02000
]
HN018_02160
Transporters [BR:
lck02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
AI-2 transporter
HN018_02160
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_29
Mg_chelatase
RsgA_GTPase
ATP-grasp
AAA_23
Motif
Other DBs
NCBI-ProteinID:
QKE89009
UniProt:
A0A6M8HHZ3
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Position
510859..512415
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AA seq
518 aa
AA seq
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MSRQSSERGQAVTGHYRASDITKSYGSVSVLRGISVSLEPGRIHTMMGENGAGKSTLFKV
MSGIVRPNTGRLTLDDRSIAFASPHEAHAHGIYLVPQEPALMPELSVAETMFVGQLPTTG
KLVRRVDWTTMKMRARAALDTLGLDIAVDAPARLLSIAQQQQVECAKALLRGCRVILFDE
PTSPLTTHEVQHLFATMRRLRDEGYTLAFISHRMDEVLEISDDISVLRDGVLVDSVRHEQ
FDRTRLLSQMVGREMRTIPRRSWSCATDQPALTVSNLGRAGTFSDVSFTLHRGEILGLAG
LVGAGRTEIAEAIFALRPHDSGTVTLNGEMISDLPTDEIIRKGLVYAPEDRARHGAILQM
TIAENVTSGLIERVRHRLGLMDRADEDRIGADTVQRYRVRCAGTDQTLRQLSGGNQQKVV
FGKWMGLSPTVAILDEPTRGVDVGAKEEIYELIESLAKDGIAILVISSEMEELVRLCDRI
VSVYEGRIVAELSGDAITPERVARSYLSHAGDVQDIAA
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgacagtcgagcgagcgtgggcaggccgtgaccggtcattaccgggcgagcgat
atcaccaagagctatggcagcgtttcggttctgcgcgggatcagcgtgtcgctcgaaccc
ggtcgtatccatacgatgatgggcgagaacggcgccggcaaatccaccctgttcaaggtg
atgtcggggatcgtgcgtccgaataccggcaggctcacgctcgacgatcggtcgatcgcc
ttcgcgtcgccgcacgaggcgcatgcgcacgggatttacctggtgccccaggagccggcg
ctgatgccggagctcagcgtcgccgaaaccatgttcgttggccagctgccgaccacgggc
aagctggtgcggcgcgtcgactggaccacgatgaagatgcgggcccgggccgcgctggat
acgttggggctcgacatcgccgtggatgcgcccgcccggctgctgtcgatcgcccagcag
caacaggtggagtgcgcgaaggcactgctgcgcggctgccgggtgatcctgttcgacgaa
ccgacctcgccgctgaccacgcacgaggtgcagcatctgttcgcgacgatgcgtcggttg
cgcgacgaaggctacacgctcgccttcatcagccaccgcatggacgaggttctggagata
tccgacgatatcagcgtgctgcgcgacggagttctggtcgacagcgttcggcacgagcag
ttcgaccgcaccaggttgctgtcgcagatggtcggccgtgaaatgcgcacgatcccccgt
cgctcgtggtcgtgtgccaccgaccagccagccctgacggtctcgaacctgggccgggcc
ggaactttcagcgacgtcagcttcaccctgcatcgtggcgaaattctgggtctggccgga
cttgtcggcgccgggcggaccgagatcgccgaagcgatctttgcgttgcgcccgcacgat
tccggtaccgtaacgctgaacggcgagatgatttccgaccttccgaccgacgagatcatc
cgcaagggtctggtgtatgcaccggaggatcgcgcacgccatggcgcgatcctgcagatg
accatcgccgagaacgtcacgtccggcctgatcgagcgggtgcgtcaccgcttgggcctg
atggatcgagccgacgaggacaggatcggcgccgatacggtgcagcgttatcgcgtacgc
tgtgccggcacggaccagaccctgcgtcagctttccggtggtaaccagcagaaggtcgtg
ttcgggaaatggatgggcctgtcgccgacggtggcgatcctcgacgaaccgacccgcggc
gtcgatgtcggcgccaaggaagagatctacgaactcatcgagtccctggcgaaggacggc
atcgcgatcctggtcatatcgtccgagatggaggaactggtgcgtctctgcgaccggatc
gtttcggtctatgagggccgcatcgtcgccgagttgagtggtgatgcgatcacgcccgag
cgcgtcgcacgctcctatctcagtcacgcgggcgatgtgcaggacatcgccgcatga
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