Lichenicola cladoniae: HN018_02175
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Entry
HN018_02175 CDS
T07054
Name
(GenBank) substrate-binding domain-containing protein
KO
K10555
AI-2 transport system substrate-binding protein
Organism
lck
Lichenicola cladoniae
Pathway
lck02010
ABC transporters
lck02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
lck00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
HN018_02175
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HN018_02175
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lck02000
]
HN018_02175
Transporters [BR:
lck02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
AI-2 transporter
HN018_02175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
AGT
DUF5934
Motif
Other DBs
NCBI-ProteinID:
QKE89012
UniProt:
A0A6M8HHB4
LinkDB
All DBs
Position
514517..515530
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AA seq
337 aa
AA seq
DB search
MAHTERRTSTLRAALAALPLMLAAGLTAQAADIDTSKRIKVAMVPKLVGLSVFKANQQGA
ETAAKALNIDFLYTGPVTASAQGQVDVFNSLIARRFNAITTTSNNPTQLAPALRRARKQG
IKVVSYDSDVAADARDFFIQNTDYAAFGKALVESVAKYAGPTAKVAILSSTPDATIQNEW
INALKKYMTATYPKMQIVTTQYGQSSPSQSLTAGLNILQANADVTGIIAPDGAAEVGAAA
AVEKLGRTGKVFVTGCSDPNAIRQYVKSGIIKESPLWDEVKEGELVMYVARLAVNNAIQR
NGDFTAGDLGSFTAKDGVIVFSEPLIFNAANIDQYQF
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atggctcatacagaacgtcggacgtccacgctccgtgcagctctcgcggcactgccgctg
atgctcgcggccgggctcaccgcccaggccgccgacatcgacacctcgaagcgcatcaag
gtcgcgatggtgccgaagctggtcgggctatcggtgttcaaggcgaaccagcagggtgct
gaaactgccgcaaaggcactcaatatcgacttcctgtacaccggtccggtcaccgcctcg
gcgcagggccaggtcgacgtgttcaacagcctgatcgcccgtcgcttcaacgccatcacc
accacgtcgaacaacccgacccagctggcaccggcactgcgccgcgcgcgcaagcagggc
atcaaagtcgtctcctacgacagcgacgttgcggccgatgcccgcgacttctttatccag
aacaccgactatgccgccttcggcaaggcgctggtcgaatcggtcgcgaaatatgcaggg
ccgaccgcgaaggtggccatcctgtcctcgacgcccgatgccacgatccagaacgaatgg
atcaacgcgctcaagaaatacatgaccgcgacctaccccaagatgcagattgtcaccacc
caatatggccagtcgagcccgtcgcaatccctgacggccggcctgaacattctgcaggcc
aacgccgatgtgacaggcatcatcgccccggacggcgccgccgaggtgggtgccgcggcc
gcggtcgagaaactgggccgcaccggcaaggtgttcgtgactggctgcagcgatccgaac
gcgatccgtcagtacgtgaagtccgggatcatcaaggaaagcccgttgtgggatgaggtc
aaggaaggcgaactggtcatgtatgttgcccgcctggccgtcaacaacgcgatccagcgc
aacggcgacttcaccgccggcgatctcggctcgttcacggcaaaggatggcgtcatcgtg
tttagcgaaccgctgatcttcaatgccgcaaatatcgatcagtatcagttctga
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