KEGG   Lichenicola cladoniae: HN018_03350
Entry
HN018_03350       CDS       T07054                                 
Name
(GenBank) RNA polymerase sigma factor
  KO
K24073  RNA polymerase sigma factor CnrH
Organism
lck  Lichenicola cladoniae
Brite
KEGG Orthology (KO) [BR:lck00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lck03021]
    HN018_03350
Transcription machinery [BR:lck03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     HN018_03350
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4_2 Sigma70_ECF Sigma70_r4 PhyR_sigma-like HTH_AsnC-type
Other DBs
NCBI-ProteinID: QKE89207
UniProt: A0A6M8HLI0
LinkDB
Position
757504..758067
AA seq 187 aa
MNESDEALAGQARTGNRQAFEVLVQRHKEPLYRFCRRYIGNADDASDVLQDAFVAAWMGL
QRYDERRPFAAWLQRITLNKCRDFGRRGLVRRLFLARFEREQPTEAALTEDGATFDPHTE
RLARLDREIAALPPAYKEALLLTTLGGMSHLEAAEQLGISVKAVEMRIYRAKQRLTELMN
DEQSHSH
NT seq 564 nt   +upstreamnt  +downstreamnt
gtgaacgaaagcgacgaggcactggccggacaggctaggactgggaacagacaggcattc
gaggttctcgtccaacggcacaaagagccgctctaccgcttctgccgccgctacatcggc
aatgcagacgatgcctccgatgttctccaggatgcattcgtcgcggcgtggatgggatta
cagcgctatgacgagcgccggccctttgccgcctggctgcaaaggatcaccctcaacaag
tgccgcgactttggacgccgtggtctggtccggcggctcttcctcgctaggtttgaacgg
gaacagcctaccgaagcagcgttgactgaggacggtgcaacattcgatccgcacaccgag
cgcttggctcggcttgaccgtgaaatcgcggccctaccgccggcttacaaggaagcgctt
cttctgacgacgttgggcggtatgagccacctggaagcggccgagcagctcggtatctcc
gtcaaagcggtggaaatgcgaatctaccgcgcaaaacaacggctcaccgaactcatgaac
gacgagcagtcccatagccattga

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