Lichenicola cladoniae: HN018_03350
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Entry
HN018_03350 CDS
T07054
Name
(GenBank) RNA polymerase sigma factor
KO
K24073
RNA polymerase sigma factor CnrH
Organism
lck
Lichenicola cladoniae
Brite
KEGG Orthology (KO) [BR:
lck00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lck03021
]
HN018_03350
Transcription machinery [BR:
lck03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HN018_03350
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_ECF
Sigma70_r4
PhyR_sigma-like
HTH_AsnC-type
Motif
Other DBs
NCBI-ProteinID:
QKE89207
UniProt:
A0A6M8HLI0
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All DBs
Position
757504..758067
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AA seq
187 aa
AA seq
DB search
MNESDEALAGQARTGNRQAFEVLVQRHKEPLYRFCRRYIGNADDASDVLQDAFVAAWMGL
QRYDERRPFAAWLQRITLNKCRDFGRRGLVRRLFLARFEREQPTEAALTEDGATFDPHTE
RLARLDREIAALPPAYKEALLLTTLGGMSHLEAAEQLGISVKAVEMRIYRAKQRLTELMN
DEQSHSH
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgaaagcgacgaggcactggccggacaggctaggactgggaacagacaggcattc
gaggttctcgtccaacggcacaaagagccgctctaccgcttctgccgccgctacatcggc
aatgcagacgatgcctccgatgttctccaggatgcattcgtcgcggcgtggatgggatta
cagcgctatgacgagcgccggccctttgccgcctggctgcaaaggatcaccctcaacaag
tgccgcgactttggacgccgtggtctggtccggcggctcttcctcgctaggtttgaacgg
gaacagcctaccgaagcagcgttgactgaggacggtgcaacattcgatccgcacaccgag
cgcttggctcggcttgaccgtgaaatcgcggccctaccgccggcttacaaggaagcgctt
cttctgacgacgttgggcggtatgagccacctggaagcggccgagcagctcggtatctcc
gtcaaagcggtggaaatgcgaatctaccgcgcaaaacaacggctcaccgaactcatgaac
gacgagcagtcccatagccattga
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