Lichenicola cladoniae: HN018_03815
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Entry
HN018_03815 CDS
T07054
Name
(GenBank) helix-turn-helix transcriptional regulator
KO
K18991
AraC family transcriptional regulator, activator of mtrCDE
Organism
lck
Lichenicola cladoniae
Brite
KEGG Orthology (KO) [BR:
lck00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lck03000
]
HN018_03815
Transcription factors [BR:
lck03000
]
Prokaryotic type
Helix-turn-helix
AraC family
HN018_03815
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cupin_6
HTH_18
HTH_AraC
TetR_N
AraC_binding
Motif
Other DBs
NCBI-ProteinID:
QKE92418
UniProt:
A0A6M8HVN1
LinkDB
All DBs
Position
860572..861495
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AA seq
307 aa
AA seq
DB search
MPLTDDVLSELAQLLRVRPELDDVCRFGGPWISTHVAGPAGWAYFHLVTRGHVQLDRPGF
DRLNLVAGDILLLPNGDAHTVHGLGFAEHLHSPVVTQLRGALRIRTSVGVELDTELICGR
LHFQAAPQTLVMAALPSVVILHIDELPLASRFKPLVEGIREELSDGRPGAASIAINLASA
LFMMMIRAQIEKSTAVTGLLQLFNQKVTSQAVLAMIREPVRAWTLDDLAHDAGASRATLV
RAFRKAAGIAPLAFLADLRLGLARHRLGSSTVSVDRIAAEVGYQSPAAFSRAFLRKFGVR
PSQNRKA
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgccgctgacagatgacgttttgagtgagcttgctcagctgctccgcgttcgccccgag
ttagatgacgtttgccggtttggtgggccgtggatatccacccacgtcgccggaccagcc
ggttgggcgtattttcacctcgtcacccggggtcatgtgcaactcgaccggcccggtttt
gatcgcctgaatctcgtagcgggcgacattctgctactgccaaacggggatgcccacaca
gtacatgggcttgggttcgctgagcatctgcattcgccggtcgtgactcagctccgcggc
gcgctccggatacgaaccagcgtcggtgttgagttggatacggagttgatctgtggccgg
ctgcactttcaggcggcgccgcaaaccttggtcatggcagcccttccgagcgttgtgatc
ctgcatatagacgaactgccccttgccagtcgcttcaaaccgctggtcgagggtatccgg
gaggagttgagtgacggtcgccccggcgctgcctcaatcgcaataaatcttgctagcgct
ttatttatgatgatgattcgggcgcagatcgagaagtcaacagctgtcaccggcctgctg
cagttgttcaaccaaaaggtgacgtctcaagcagtcctggcgatgatacgcgagcccgta
cgcgcctggacgctggatgatctcgcacatgacgcgggagcctcgcgggcgacgctagta
cgcgcatttcgcaaggctgctggaatcgcgccactggcgtttttggctgacttacgcctt
gggcttgcacggcaccgtctggggagcagcacggtctcggttgatcgaattgcagcagaa
gtaggctatcaatcgcccgctgcgtttagtcgcgcgtttctccgcaagtttggtgttcgg
ccgagccaaaaccggaaagcttag
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