Lichenicola cladoniae: HN018_05815
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Entry
HN018_05815 CDS
T07054
Symbol
lptF
Name
(GenBank) LPS export ABC transporter permease LptF
KO
K07091
lipopolysaccharide export system permease protein
Organism
lck
Lichenicola cladoniae
Pathway
lck02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lck00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
HN018_05815 (lptF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lck02000
]
HN018_05815 (lptF)
Transporters [BR:
lck02000
]
ABC transporters, prokaryotic type
ABC-2 type and other transporters
Lipopolysaccharide transporter
HN018_05815 (lptF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LptF_LptG
VIT1
Motif
Other DBs
NCBI-ProteinID:
QKE89628
UniProt:
A0A6M8HMQ3
LinkDB
All DBs
Position
complement(1274557..1275744)
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AA seq
395 aa
AA seq
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MLPSFAGTPWRVERGMIAPFLTRLDRYVLRQLLAALLATTGGLAALIWLTQSLRFVSLVV
DRGLSFRVFVQLTSLLIPSFVAVILPITTFVVVQFVYQRLATDRELTVMRAAGLPPSAIA
RPGLYCAGIAVALSYVLNIWIVPASYHSFREYEFEIRNKMAAFLLQEGVFTPVSPTMTVY
IRTRDRDGTLHGILVQDDRQKNSRATILAEHGHLESSGDVPRVVLYNGSREEIDRQTGRL
NVLTFARNTIDLAASSKDDDIRYRDATEMSLNELMHPDPRFVQARDVGKFAVEAQRRLSS
PLTAFSFAMVALVAVLSGAFSRHGNIARPLAAIMTVVGLLALGLVEQSVAARTPALIPLI
WLQAILPGLICCGMLFWPELGLSRRAAPSNALAAE
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgttgccgtcttttgccggaacgccatggagggtagagagaggcatgattgcgcctttc
ctgaccaggctggaccggtacgtgctgcgacagttgctggcagcactgctcgcgaccacc
ggcggactggcggccctgatctggctgacccagtcgctgcgcttcgtcagcctggtcgtc
gaccgaggcctgtcgttcagggtgttcgtacagctgaccagcctgctgatcccgagtttc
gttgccgtcatcctgccgatcaccaccttcgttgtcgtccagttcgtctaccagcgcctg
gccaccgaccgggagctgacggtcatgcgggccgccggcctgccgccctcggcgatcgcc
aggccgggcttgtactgcgccggcatcgcggtcgcgctctcctacgtcctgaacatctgg
atcgttccggcgagctatcacagcttccgcgaatacgagttcgagatccgcaacaagatg
gccgccttcctgctccaggaaggggtattcacgccggtctcgccgaccatgacggtctat
atccggacgcgcgaccgggacgggaccctgcacggcatcctggtccaggatgatcgccag
aagaacagccgcgccaccatcctggccgagcacggccaccttgagtccagcggcgacgtg
ccgcgggtcgtgctctataatgggtcacgcgaggaaatcgaccggcagacgggccggctg
aacgtgctaaccttcgcgcgcaacacgatcgacctcgccgcaagctccaaggacgacgac
atccgttaccgcgatgccaccgagatgtcgttgaacgagctgatgcaccccgacccgcgg
ttcgtgcaggcgcgcgatgtcggcaagttcgcggtcgaggcgcagcgccgtctcagctcc
ccgctgaccgcgttctcgttcgccatggtggccctggtggcggtgctgtccggggcgttc
tcccggcatggcaacatcgcacgcccgctggcggccatcatgaccgtggtcgggctgctt
gccctggggctggtcgagcagagcgtagccgcccgcacgcctgccctgattccgctgatc
tggctgcaggcgatcctgcccggcctgatctgctgcgggatgctgttctggcccgagctc
gggttgagccgccgcgccgcgccgtccaatgcactcgccgcagagtga
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