KEGG   Lichenicola cladoniae: HN018_06295
Entry
HN018_06295       CDS       T07054                                 
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
  KO
K03702  excinuclease ABC subunit B
Organism
lck  Lichenicola cladoniae
Pathway
lck03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:lck00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    HN018_06295 (uvrB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lck03400]
    HN018_06295 (uvrB)
DNA repair and recombination proteins [BR:lck03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     HN018_06295 (uvrB)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      HN018_06295 (uvrB)
SSDB
Motif
Pfam: UvrB_inter UvrB_3rd Helicase_C UvrB ResIII DEAD UVR AAA_30 AAA_22 UB2H SWI2_SNF2 Kinesin AAA_16 DUF2963 Microtub_bd
Other DBs
NCBI-ProteinID: QKE89702
UniProt: A0A6M8HMZ5
LinkDB
Position
1369982..1372207
AA seq 741 aa
MSVTLQKKPSRKPERPARPAIDPANQFEPDRQAAKPKLRQLKVVSPYEPAGDQPTAIREL
VAGVQSGERDQVLLGVTGSGKTFTMAKVIEAVQKPTLILAPNKTLAAQLYGEMKQFFPEN
AVEYFVSYYDYYQPEAYVPRSDTYIEKDSAINEQIDRMRHAATQALLERNDVIIVASVSC
IYGIGSVETYSRMVVKMQVGGAIARDTLVKALVEQQYRRNDASFQRGTFRVRGETVDVFP
VQNEDRAWRIMLFGDEIESIIEFDPLTGEKTADLEEVHVYANSHYVTPRPTLNQATILIK
QELRERLIEFTANGKLLEAERLQQRCTFDLEMIETTGACKGIENYSRYLSGRKPGDPPPT
LFEYLPEDALLIVDESHVTVPQIGGMERGDFARKSILSEFGFRLPSCLDNRPLRFDEWER
FRPQTIHVSATPGPWEMDRVEGVFAEQVIRPTGLIDPVTEIRPVEHQVDDLLAECRIVIG
RGGRILVTTLTKRMAEDLTEYMTEAGIKVRYLHSDVDTLERIEIIRDLRLGAFDVLIGIN
LLREGLDIPECQLVAILDADKEGFLRSRTSLIQTIGRAARNIDGRVLLYADRMTDSLKYA
IEETDRRRTRQSDWNTAHGITPHSVRTHIGDAIKSVFEQDYVTVSPIKDGGITDMVGKDL
KAAIVDIEKRMRAAAADLEFETAARLRDELKRLEALDLGLEPPPPSPASRGGKVAKSRTP
EPLGPGGGGYDPSQRRGKRRG
NT seq 2226 nt   +upstreamnt  +downstreamnt
atgtcagtgacgctccagaagaagccttcccgcaagcccgagcggccggctcgtccggcg
atcgatccggccaaccagttcgagccggaccggcaggcggccaagccgaagctgcgccag
ctgaaggtggtttctccctatgagccggccggcgaccagccgacggcgatccgcgagctg
gtggctggcgtgcagtcgggcgagcgcgaccaggtgctgcttggcgtcaccgggtccggc
aagacctttaccatggccaaggtgatcgaggcggtgcagaagccgaccctgatcctggcg
ccgaacaagacgctggcggcccagctctatggcgagatgaagcagttctttccggagaac
gcggtcgagtatttcgtcagctactacgactactaccagcccgaagcctacgtgccgcgc
tccgatacctatatcgagaaggacagcgcgatcaacgagcagatcgaccggatgcgccac
gcggcgacccaggcgctgctcgagcgcaacgacgtcatcatcgtggcctcggtgtcctgc
atctacggtatcggttcggtcgagacctactcccgcatggtggtcaagatgcaggtcggc
ggcgcgatcgcgcgcgacacgctggtcaaggcgctggtcgagcagcaataccggcgcaac
gacgcctcgttccagcgcggcaccttccgcgtgcgcggcgagaccgtcgatgtgttcccg
gtgcagaacgaagaccgcgcctggcggatcatgctgttcggggacgagatcgaaagcatc
atcgagttcgacccgctgacgggcgaaaagaccgccgacctcgaggaggtgcacgtctac
gccaacagccattacgtcacgccgcgtccgacgctgaaccaggccaccatcctgatcaag
caggagctgcgcgaacggctgatcgagttcaccgcgaacggcaagctgctcgaggccgag
cggctgcagcagcgctgcaccttcgatctcgaaatgatcgagaccacgggcgcctgcaaa
ggaatcgagaactactcgcgctatctgtccggccgcaagcccggcgatccgccgccgacc
ctgttcgaatacctccccgaggacgccttgctgatcgtggacgaaagccatgtgaccgtg
ccgcagatcggcggcatggagcgcggagactttgcacgcaaatcgatcctgtccgagttc
gggttccggcttccctcgtgcctggataaccgtccgttgcgcttcgacgagtgggagcgc
ttccggccgcagaccatccatgtgagcgccacgcccggcccgtgggagatggatcgcgtc
gaaggcgtgttcgccgaacaggtgatccggccgaccgggctgatcgatccggtcaccgag
atccgcccggtcgagcaccaggtcgacgatctcctggccgaatgccggatcgtgatcggc
cgcggcggccgtatcctggtcaccacgctgaccaagcgcatggccgaggacctcaccgaa
tacatgaccgaggcgggcatcaaggtccgctacctgcactcggacgtcgacacgctcgag
cgcatcgagatcattcgcgacctgcgtctcggcgcattcgacgtgctgatcggcatcaac
ctgctgcgcgagggcctggatattcccgagtgccagctcgtggcgatcctggatgccgac
aaggaagggtttctccgctcgcgcacctcgctgatccagaccatcggccgcgccgcccgc
aacatcgacgggcgcgtgctgctgtacgccgaccgcatgaccgacagcctgaaatacgcg
atcgaggaaaccgatcgccggcgcacccggcaatccgactggaacaccgcgcacggcatc
acgccgcattcggtacgcacgcatatcggcgacgcgatcaagtcggtattcgagcaggac
tacgtgacggtgtcgccgatcaaggatggcggcatcaccgacatggtcggcaaggacctg
aaggcggcgatcgtggatatcgagaagcgcatgcgcgccgccgccgccgatttggaattc
gagaccgcggcccgcctgcgcgacgagctcaagcggctggaggcgctcgatctcggactc
gagccgccaccgccgtcgccggcttcacgcggcggcaaggtcgccaagtctcggacgccc
gagccgctcggtccgggcggtggcgggtatgatccgtcgcagcgacggggcaagcggcgg
ggttga

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