Lichenicola cladoniae: HN018_07095
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Entry
HN018_07095 CDS
T07054
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lck
Lichenicola cladoniae
Pathway
lck03420
Nucleotide excision repair
lck03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lck00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HN018_07095
03430 Mismatch repair
HN018_07095
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lck03400
]
HN018_07095
Enzymes [BR:
lck01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HN018_07095
DNA repair and recombination proteins [BR:
lck03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HN018_07095
MMR (mismatch excision repair)
Other MMR factors
HN018_07095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
PcrA_UvrD_tudor
DUF3553
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QKE89841
UniProt:
A0A6M8HNG5
LinkDB
All DBs
Position
complement(1525421..1527679)
Genome browser
AA seq
752 aa
AA seq
DB search
MTSYLERLNPEQREAVETVDGPLLVLAGAGTGKTRVLTTRFAHILLSGRASPGQVLAVTF
TNRASREMRERVAVILGRPVEGLWLGTFHALCARMLRRHAEYVGLTSSFTILDTDDQLRL
LKQVMELHRIDIKRWPAPGLMGAIQRWKDRGLTPDRITPSEDTDFAGGKARQIYGDYQER
LRQLNAADFGDLMLHIVEILRTRPDVLAQYHRAFRYILVDEYQDTNTIQYLWLRLLAQRE
GFPSNICCVGDDDQSIYSWRGAEVENILRFEKDFPGATIVRLESNYRSTAPILGAASGLI
AHNEGRMGKTLRPGREDSQGDKVLIASVWDSDEEARLVGERIEQLHREGNTLSEMAILVR
AGFQTRAFEERMITLGLPYRVIGGMRFYERAEIRDAIAYMRAMNQPSDDLAFERIINLPR
RGVGDVALSALHSRARADRVPMTEAVLRLLADGTLKGRVRDQLGQLMATLERGRIGLAEA
AQGEQIAPVHIRVVETLLEESGYIDMWKRDKSPDAPGRLDNLKELVRALVDFETLGGFLE
HVSLVMENDENAGADRVNLMTLHGAKGLEFDNVFLPGWEEGLFPSQRTMDESGNKGLEEE
RRLAYVGITRARKRALISHAANRRIYANWQSSIPSRFIDEIPEEHAERMGSTSLAREQLR
NAPTVFSGQFPLMAKRPRAIESWEQPGRAPRSDTLAPGTRVFHQKFGYGIVKSADDNKLD
VEFEKAGFKRVLDNYVQQVSEGEIGADIGTGS
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atgacatcctatctcgaacggctgaatcccgagcagcgcgaggccgtcgagacggtcgac
ggtcccttgctggtgctggcaggtgccggcaccggcaagacgcgcgtgctgaccacccgc
tttgcccatatcctgctgagcgggcgtgcctcgcccggccaggtgctggcagtcaccttc
accaaccgggcgtcacgcgagatgcgcgaacgggtggcggtcattctcggccgcccggtc
gaggggctgtggctgggcaccttccacgcgctgtgtgcccgcatgctccggcgccacgcc
gagtatgtcgggctcacctccagcttcaccatcctggataccgacgaccagctccgcctg
ctgaagcaggtgatggagctgcaccggatcgacatcaagcgctggccggcacccgggctg
atgggcgcgatccagcgctggaaggatcgcggtctgacgccggaccggatcaccccatcc
gaggataccgactttgccggcggcaaggcgcggcagatctacggcgactaccaggagcgc
ctgcgccagctcaacgccgccgatttcggcgacctgatgctgcatatcgtcgagatcctg
cgcacccggccggacgtgctggcgcagtatcaccgtgccttccgctacatcctggtcgac
gagtaccaggataccaacaccatccagtatctgtggctgcgcctgcttgcccagcgcgag
ggcttcccctcgaacatctgctgcgtcggcgacgacgaccagtcgatctattcatggcgc
ggcgccgaggtggaaaacatcctgcgcttcgagaaggatttccccggcgccaccatcgtc
cggctggagagcaactatcgctcgaccgcgccgatcctgggcgcggcttccgggctgatc
gcccataacgagggtcggatgggcaagaccctgcggcccgggcgcgaggactcccagggc
gacaaggtgctgatcgcctcggtgtgggactccgacgaggaagcccgtctggtgggcgag
cggatcgagcagttgcaccgcgaaggcaacaccctgtccgagatggcgatcctggtccgt
gccggcttccagacccgcgcattcgaggagcggatgatcacgctgggcctgccttatcgg
gtgatcggcggcatgcgcttctatgagcgggccgagatccgcgatgcgatcgcctacatg
cgggcgatgaaccagccgtccgacgacctcgccttcgaacggatcatcaacctgccccgc
cgcggtgtcggcgacgtggcgttgagcgcgctgcacagccgcgcgcgtgccgaccgcgtg
ccgatgaccgaggccgtcttgcggcttctggccgacggcaccctcaagggccgcgtgcgc
gaccagctcgggcaattgatggcaacgctcgagcgcggccgcatcggcctggccgaggct
gcccagggcgagcagatcgcaccggtgcatatccgcgtggtcgagacgctgctcgaggag
agcggctacatcgacatgtggaaacgcgacaagtcgcccgacgccccgggacgtctcgac
aacctcaaggagctggtgcgcgcgctggtcgatttcgaaacattgggcggcttcctggaa
cacgtctcgctggtgatggagaacgacgagaatgccggcgccgaccgcgtcaatcttatg
acgttgcacggagccaaggggctcgagttcgacaacgtgttcctgcccggctgggaggaa
ggcctgttcccgagccagcgcaccatggacgagagcggcaacaagggtctcgaggaggag
cgccgcctggcctatgtcggcatcaccagggcccgcaagcgcgcgctgatcagccacgcc
gccaaccggcgcatctacgccaactggcagagctcgatcccgagccgcttcatcgacgag
atccccgaggagcatgccgaacggatgggctccacgtcactcgcccgcgagcagttgcgc
aatgcgcctacggtgttcagcggccagttcccgctgatggccaagcgtccgcgcgcgatc
gagagctgggagcagcccggacgggcgccacgctccgacacgctggcacccggcacccgg
gtgtttcaccagaaattcggctacgggatcgtgaaaagtgcagatgacaacaagctcgat
gtcgagttcgagaaagccgggttcaagcgcgtgctcgacaactacgtgcagcaggtgagc
gaaggcgagatcggcgccgacatcggaaccggatcatga
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