Lichenicola cladoniae: HN018_07355
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Entry
HN018_07355 CDS
T07054
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
lck
Lichenicola cladoniae
Pathway
lck03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lck00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HN018_07355 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lck03019
]
HN018_07355 (recQ)
03400 DNA repair and recombination proteins [BR:
lck03400
]
HN018_07355 (recQ)
Enzymes [BR:
lck01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HN018_07355 (recQ)
Messenger RNA biogenesis [BR:
lck03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HN018_07355 (recQ)
DNA repair and recombination proteins [BR:
lck03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HN018_07355 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
QKE92501
UniProt:
A0A6M8HWR4
LinkDB
All DBs
Position
1590336..1592177
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AA seq
613 aa
AA seq
DB search
MRPTRDAGQQPESPSAVLARVFGFPGFRGLQQQAIDRVMAGGDVLLLMPTGGGKSICYQL
PALCRPGMGLVVSPLIALMDDQVAALRQVGVNAAALHSELEPEEAARIKSDLAGGRLDLL
YVSPERLLSPGMLDRLSRLEISVIAIDEAHCVSAWGHEFRPEYRALAQLPQRLPGVPRIA
LTATADPRTRSDIIDALAMPDAEVLVASFHRPNLHITARPKGSELTQLLELLGRHKDEAS
IVYCGSRNKTERIARSLRERGWPAIPFHAGLAPIEKRAGLLRFRSGEPVVICATIAFGMG
IDRPDVRSVVHLDMPDSPEGYYQQIGRAGRDGERSDTLLLFGGEDMARARHWLDQSQAPV
AQKRFMSQRLESMIGLAETTSCRTRALLACFGEDLAVDCGHCDNCISPLATFDGTVAAQK
VLSAIYRTGQMFGALHIVSVLRGKQTEAVKRHRHDELALYGIGKEKSDGFWRSVIRQLVA
RGALKIQGEYASLALHESVARPILRGEQPVMLSEDAAATLGSVTSASPSRSSSGAAVRAL
DTTAEARFAALRNWRLTEARSQAVPPYVIFSDATLRDIAADQPDSHAALAEIKGVGVSKL
ERYADAVLGILRG
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atccggccgacgcgggacgcaggacagcagccagagagcccgagcgccgtcctcgcacgt
gtcttcggcttcccgggattccgggggctgcagcagcaggcgatcgatcgtgtcatggca
ggcggcgatgtgctcctgctgatgccgaccggcggcggcaagagcatctgctaccagctc
ccggccttgtgccgcccgggcatgggactggtggtgtcgccgcttatcgcgctgatggac
gaccaggtggcggcgctgcggcaggtcggcgtcaatgcggcggcgctgcattccgagctc
gagccggaggaagccgcgcgcatcaagtcagacctcgccggcggacgactggacctgctg
tatgtctctcccgagcggctgctgtcgcccggcatgctggaccggctgtcccgtctggaa
atctcggtcatcgcgatcgacgaggcccattgcgtgtcggcctggggccatgagttccgg
ccggaataccgcgccctggcgcaactgccgcaacgcctgcccggcgtgccgcgcatcgcg
ctgaccgccaccgccgatccgcgcacccgctccgacatcatcgacgcgctggcgatgccg
gacgcggaagtgctggtggcgagcttccatcgccccaacctgcacatcaccgcccggccg
aaaggctccgagctgacgcagctgctggaactgctcggccggcacaaggacgaggcctcg
atcgtctattgcggcagccgcaataagaccgagcggatcgcccggtcgctgcgcgaacgc
ggctggccggcgatcccgttccatgccgggctggcgccgatcgagaagcgcgcaggattg
ctgcggttccggtccggcgagccggtcgtgatctgcgccaccatcgccttcggcatgggc
atcgaccggccggacgtacgcagcgtggtccatctcgacatgcccgacagccccgagggc
tactaccagcagatcggccgcgccggccgcgacggcgagcgatcggacacgctgctgctg
ttcggcggcgaggacatggcccgcgcccgccactggctcgaccagagccaggcccccgtg
gcccagaagcggttcatgagccagcggctggagtcgatgatcgggctggccgaaaccacc
tcctgccgcacccgtgcgttgctggcctgcttcggcgaggatctcgcggtcgattgcggc
cattgcgacaactgcatatcgccgctcgccacgttcgacggcaccgtcgccgcgcagaag
gtgctctcggcgatctaccggaccggccagatgttcggcgccctgcatatcgtttcggtg
ctgcgcggcaagcagaccgaggcggtcaagcgtcatcgccacgacgagctcgcgctgtac
ggcatcggcaaggagaagtcggacgggttctggcgcagcgtgatccgccagctggtggcg
cgtggcgcgctcaagatccagggcgaatatgccagcctggcgctgcacgagagcgtcgcg
cggccgatcctgcgtggcgaacagccggtgatgctgagcgaggacgccgccgcgacattg
ggcagcgtgacgtcggcatccccatcgcgcagcagctcgggcgccgccgtgcgggcgctc
gacaccaccgccgaggcccggttcgccgccctgcgcaactggcggctgaccgaggcccgc
tcgcaggcggtgccgccctacgtgatcttcagcgacgccaccttgcgcgacatcgccgca
gaccagccggacagccatgccgcgctggcggagatcaagggcgtcggcgtctccaagctc
gagcgctacgccgatgcggtgctaggcatcctgcgcggctga
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