Lichenicola cladoniae: HN018_08110
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Entry
HN018_08110 CDS
T07054
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
lck
Lichenicola cladoniae
Pathway
lck03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lck00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HN018_08110 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lck03019
]
HN018_08110 (pnp)
03016 Transfer RNA biogenesis [BR:
lck03016
]
HN018_08110 (pnp)
Enzymes [BR:
lck01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
HN018_08110 (pnp)
Messenger RNA biogenesis [BR:
lck03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
HN018_08110 (pnp)
Transfer RNA biogenesis [BR:
lck03016
]
Prokaryotic type
tRNA degradation factors
HN018_08110 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
BioW
S1_RRP5
DHHA1
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
QKE90016
UniProt:
A0A6M8HNW3
LinkDB
All DBs
Position
complement(1761257..1763476)
Genome browser
AA seq
739 aa
AA seq
DB search
MFDFYAKELEWGGRTLRLETGKIARQADGAVMVYYGDTIVLCTAVGAKSVKPGQDFFPLT
VNYQEKAFAAGKIPGGFFKREGRPSEAEVLNSRLIDRPLRPLFPHNFRNEVQVVATVLSH
DLENDPAIVAMIGCSAALTLSGIPFFGPIAGCRVGYANGHYVLNPTLAEAKEGQLDLVLA
GTTEGVLMVESEAHELSEEVMLGAVTFGHAAFQPVIEAIIALAEHSAKTPWTLAEPTEAE
TTLKARIDTLGRESIASAYLERVKQARTEKVGAAKKVVLDALKAEGLDADKAKPLLKELE
ADIVRGSVLDTGLRIDGRDTKTVRPIVSEVGILPRAHGSALFTRGETQALVVTTLGTGQD
EQIIDALEGEYRSNFMLHYNFPPYSVGEAGRMGSPGRREIGHGKLAWRAIHPLLPTKEVF
PYTVRVVSEITESNGSSSMATVCGTSLALMDAGVPLVRPVAGIAMGLIKEDRGFAVLSDI
LGDEDHLGDMDFKVAGSEAGITALQMDIKITSITPEIMKIALEQARDGRLHILGEMAKAL
TENRTGVSATAPKITVINVPKEKIRDVIGTGGKVIREIVEFSGAKIDIGDDGTIKIAASS
DEQAQKAIDRIRGIVAEPELGAIYVGKVVKTADFGAFVNFLGARDGLVHISELAQGRVAK
TADVVSVGDAVKVKVMGFDDRGKVKLSMRVVDQATGADITDAVGGKSGGRDDEGGGRPEG
RREDRPRGPRPERRTDAAD
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgttcgatttttatgccaaggaactggaatggggcggccgcacgctccgcctcgagacc
ggcaagatcgcccgccaggccgacggcgccgtcatggtctattacggcgacaccatcgtc
ctgtgcaccgcggtcggcgccaagtcggtgaagccgggccaggacttcttcccgctcacc
gtgaactaccaggaaaaggcgttcgccgccggcaagatcccgggcggcttcttcaagcgc
gagggccgtccgtccgaggcggaggtactgaattcgcgcctgatcgacaggccgctgcgc
ccgctgttcccgcataatttccgcaacgaggtccaggtcgtggcgaccgtgctcagccat
gacctcgagaacgatccggcgatcgtcgccatgatcggctgttcggccgccctgaccctg
tccggcattcccttcttcggcccgatcgccggttgccgcgtcggctatgccaacggccat
tacgtgctgaacccgaccctggcggaagccaaggaaggccagctcgacctggtgctcgcc
ggcaccaccgaaggcgtgctgatggtcgagagcgaggcgcacgagctgtccgaggaagtc
atgctcggcgccgtgacgttcggccatgccgcgttccagccggtcatcgaggccatcatc
gcgcttgccgagcattccgcgaagacgccctggacgctcgccgagccgaccgaggccgag
accaccctcaaggcccgcatcgacacgctgggccgcgagagcatcgccagcgcctacctg
gagcgcgtcaagcaggcccgcaccgagaaggtcggcgctgccaagaaggtcgttctcgac
gcgctgaaggccgagggcctggatgccgacaaggccaagccgctgctgaaggagctcgag
gccgacatcgtccgcggctccgtgctcgacaccggcctgcgcatcgatggccgcgacacc
aagaccgtgcgcccgatcgtgtccgaggtcggcatcctgccgcgcgcgcacggctcggcg
ctgttcacccgcggcgagacccaggcgctggtcgtcaccacgctcggcaccggccaggac
gagcagatcatcgacgcgctcgagggcgagtaccgctccaacttcatgctgcactacaac
ttccctccctactcggttggcgaagctgggcgcatggggtccccgggtcgtcgcgagatc
ggccatggcaagctggcatggcgtgccatccatccgctgctgcccaccaaggaagtgttc
ccgtacacggttcgcgtcgtgtccgagatcaccgagagcaacggctcgtcctcgatggcg
acggtctgcggcaccagcctggcgctgatggatgcgggcgttccgctcgtccgtccggtg
gccggcatcgccatgggcctgatcaaggaagatcgcggcttcgcggtgctgtccgacatc
ctcggcgacgaggatcacctgggcgacatggacttcaaggtggccggttcggaagcgggc
atcaccgccctgcagatggacatcaagatcacctcgatcacgcccgagatcatgaagatc
gcgctcgagcaggcgcgtgacggccgcctgcacatcctcggcgagatggccaaggcgctg
accgagaaccgtaccggcgtgtccgccacggccccgaagatcaccgtgatcaacgtgccg
aaggaaaagatccgcgacgtcatcggcaccggcggcaaggtgatccgcgagatcgtcgag
ttctccggcgccaagatcgacatcggcgacgacggcaccatcaagatcgccgcctcgtcc
gacgagcaggcgcagaaggcgatcgaccgcatccgcggtatcgtggccgagccggagctc
ggtgcgatctatgtcggcaaggtggtcaagaccgccgatttcggtgcgttcgtgaacttc
ctcggcgcccgcgacggtctcgtgcacatctccgagctggcccagggccgagttgccaag
accgcagacgtggtctcggtcggcgatgccgtgaaggtgaaggtcatgggcttcgacgat
cgtggcaaagtgaagctgtccatgcgtgtggtcgaccaggcaaccggtgcggacatcacc
gatgcggtcggcggcaagagcggcggacgtgacgacgagggcggtggtcgtcccgaaggt
cggcgtgaggacaggccgcgtggcccgcgtccggaacgtcgcactgacgcggcggactga
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