Lichenicola cladoniae: HN018_09850
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Entry
HN018_09850 CDS
T07054
Name
(GenBank) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
lck
Lichenicola cladoniae
Pathway
lck03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lck00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HN018_09850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lck03021
]
HN018_09850
03400 DNA repair and recombination proteins [BR:
lck03400
]
HN018_09850
Enzymes [BR:
lck01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HN018_09850
Transcription machinery [BR:
lck03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
HN018_09850
DNA repair and recombination proteins [BR:
lck03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
HN018_09850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
B12D
Motif
Other DBs
NCBI-ProteinID:
QKE90302
UniProt:
A0A6M8HPM2
LinkDB
All DBs
Position
2126901..2127299
Genome browser
AA seq
132 aa
AA seq
DB search
MARVTVEDCVQRVPNRFELVLLAAQRARNLSRGEELTVDRDNDKNPVVALREIAEETVEL
SRLHQDLVKSLARAPEPEPADEEVLDLIPTDQNIFGLQDVSVEEEASAMGTELTPEELEA
AIEAELGGRSRR
NT seq
399 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgcgtcaccgtcgaagactgtgtccaaagagttcccaaccgcttcgagcttgtg
ctgctggctgcccagcgcgcgcgcaacctgagccgtggcgaagaactcaccgtggaccgg
gacaacgacaagaaccctgtggtggctcttcgcgagatcgccgaagagaccgttgaactg
agccgcctgcaccaggatctggtgaagtcgttggcccgggctcccgagcccgagcctgcc
gacgaggaggtgctcgacctcatcccgaccgaccagaacatcttcggcctgcaggatgtg
tcggtcgaagaggaagccagtgccatggggacggaattgaccccggaagagctggaagct
gctatcgaggctgaactcggcggacgttcgcgccgatag
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