Lichenicola cladoniae: HN018_09870
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Entry
HN018_09870 CDS
T07054
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
lck
Lichenicola cladoniae
Brite
KEGG Orthology (KO) [BR:
lck00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
HN018_09870 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lck03019
]
HN018_09870 (rnc)
03009 Ribosome biogenesis [BR:
lck03009
]
HN018_09870 (rnc)
03036 Chromosome and associated proteins [BR:
lck03036
]
HN018_09870 (rnc)
Enzymes [BR:
lck01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
HN018_09870 (rnc)
Messenger RNA biogenesis [BR:
lck03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
HN018_09870 (rnc)
Ribosome biogenesis [BR:
lck03009
]
Eukaryotic type
90S particles
RNase
HN018_09870 (rnc)
Prokaryotic type
rRNA processing factors
HN018_09870 (rnc)
Chromosome and associated proteins [BR:
lck03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
HN018_09870 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
QKE92567
UniProt:
A0A6M8HWN2
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All DBs
Position
2131056..2131808
Genome browser
AA seq
250 aa
AA seq
DB search
MHEPASPLAVAMAKVEGVIGWQFHKPALLREALTHRSAAHEAQTAGTAPGGGHKRGRRTT
QKGLGSNERLEFIGDRVLGLLMAEWLISRFPDEQEGKLGPRLAQLVSRPVLARIAIDLGL
REALDVAPHEERAGIRDAANVLADSVEAVLGATYLDGGLDPARRFVHQAWNAAMTGQALP
PKDAKTALQEWLLGRGLALPIYTVASAEGPSHAPRFVIRVEANGRSGTGEAGAKRAAESL
AASDLLSQLA
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgcacgagcccgcctcgccgctggccgttgccatggcgaaggtcgagggggtcatcgga
tggcagttccataagccggccttgttgcgcgaggcactcacgcatcggtccgcggcccat
gaggcccagaccgccggcaccgcgccgggcggcggtcacaagcgcggccgtcgtacgacc
cagaagggcctcggctcgaacgagcggctcgagttcatcggcgaccgggtgctgggactg
ctgatggccgaatggctgatcagccggtttccggacgagcaggagggcaagctcggcccg
cgtctggcacagctggtgtcgcggccggtgctggcccggatcgcgatcgatctcggcctg
cgcgaggcgctcgacgtggctccgcacgaggagcgtgccgggatacgcgatgccgccaac
gtgctggcggactcggtcgaggcggtgctgggtgcgacatacctggatggtgggctggat
ccggcgcgtcgcttcgttcaccaggcctggaacgcggcgatgaccgggcaggcgctgccg
cccaaggatgccaagaccgcgctgcaggagtggctgctcggtcgcgggctggcgctgccg
atctatacggtggcatccgccgagggaccgtcgcatgcgccacggttcgtgatcagggtc
gaggcgaacggccggtccggcaccggtgaggcgggagccaagcgtgcagcagagagccta
gcggcttccgatctgctaagtcagctcgcatga
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