Lichenicola cladoniae: HN018_10035 Help Entry HN018_10035       CDS       T07054                                  Symbol rpoN Name (GenBank) RNA polymerase factor sigma-54   KO K03092   RNA polymerase sigma-54 factor Organism lck  Lichenicola cladoniae Pathway lck02020   Two-component system lck02040   Flagellar assembly Brite KEGG Orthology (KO) [BR:lck00001]  09130 Environmental Information Processing   09132 Signal transduction    02020 Two-component system     HN018_10035 (rpoN)  09140 Cellular Processes   09142 Cell motility    02040 Flagellar assembly     HN018_10035 (rpoN)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:lck03021]     HN018_10035 (rpoN) Transcription machinery [BR:lck03021]  Prokaryotic type   Bacterial type    RNA polymerase     Sigma factors      HN018_10035 (rpoN) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Sigma54_DBD Sigma54_CBD Sigma54_AID Motif Other DBs NCBI-ProteinID:  QKE90331 UniProt:  A0A6M8HQ19 LinkDB All DBs Position complement(2160300..2161835) Genome browser AA seq 511 aa AA seqDB search MAIGPRLELRQTQNLVMTPQLRQAIKLLQFSNFEVAAFIEEELERNPLLERDERIDIPPE RPALDQRVDDRTAASAEPVPTDLLVSGDTLPSDQQAPLDNDHAEQFDDGPYDGGYQDDGG GTDRSDWGMGRGASSAGNPEGLDGVAQLVAHARTLREHLSEQLRLAFDDPAERLIGAHLI ALLDGAGRVLVGDAALAQALGTSEELVTSVRARMMRFDPAGIFAFDLKGCLAAQLADRNR LDPAMVALLDNLELLGRRELRRLQAVCEVDAEDLAEMIAEIKALDPKPGASFDVTPALPI VPDVLMRAAPGGDWLLELNPDTMPRLLVSEAFHAKVLLRSPKEDRAFLSEKLASANWLVK SLHQRAQTILKVSSEVMRQQEAFLRRGVGHLRPLILRDIAEAVEMHESTVSRVTANKYIS TPRGLFELKYFFTAAISGTAGGESHSAEAVRYRIRGMVAAETLQTILSDDAIVAALRREG VDIARRTVAKYRDALRIPSSVQRKRDKSLPA NT seq 1536 nt NT seq  +upstreamnt  +downstreamnt atggcaattggaccccggctggagctaaggcagacgcagaacctggtcatgacgccgcag ttgcgtcaggccatcaagctcctccagttctcgaatttcgaggtcgccgcattcatcgag gaagagctcgagcgcaatcccctgctcgaacgcgacgaacggatcgacatcccgcccgaa cgcccggcgctcgaccagcgtgtcgacgatcgtaccgccgcttccgccgagccggtcccc accgacctcctggtctccggcgatacgctgccgagcgatcaacaggcgccgctcgataac gaccacgcggagcagttcgacgacggcccctacgatgggggctaccaggatgacggcggc ggtacggaccgcagcgactgggggatgggacgcggcgcgtcctcggccggcaacccggag gggctcgacggcgtcgcgcaactggtcgcgcacgcgcgtacgctgcgcgagcacctgagc gagcagctgcggctggcgttcgacgatccggccgaacgactgatcggcgcgcacctgatc gcgctgctcgatggcgccggacgggtgcttgtcggtgatgccgcgctcgcgcaggcgctt ggcaccagcgaggagctggtgacatcggtgcgggcgaggatgatgcgcttcgatccggcc ggcatcttcgcgttcgacctgaagggctgcctggcagcccagctcgccgatcgcaaccgg ctcgacccggccatggtggcactgctcgacaatctggagctgctgggccggcgagagctc aggcgcctgcaggcggtgtgcgaggtcgatgccgaggatctcgcggagatgattgccgag atcaaggcgctcgatccgaagcccggcgccagcttcgacgtcacgccggcgctgccgatc gtgccggacgtgctgatgcgcgcggcccccggcggcgactggctgctggagctgaacccg gacaccatgccgcggctgctcgtgtcggaggcgttccacgccaaggtgttgttgcgctcg ccgaaggaggaccgcgccttcctgtccgagaagctggccagcgccaactggctggtgaaa tcgctgcaccagcgcgcgcagacgatcctgaaggtctccagcgaggtgatgcggcagcag gaggcgttcctgcgtcggggcgtcgggcatctacgcccgctgatcctgcgcgacatcgcc gaggcggtggagatgcatgaaagcaccgtcagccgggtcacggccaacaagtacatctcg accccgcgtggccttttcgaactgaaatactttttcacagccgcgatctccgggaccgcc ggtggcgagagccatagcgccgaggccgtacgataccggatcaggggcatggtggcggct gaaacactccagaccatcctgtcggatgacgcgatcgttgctgccctccgacgggaaggc gtggacatcgcccgtcggaccgtggccaaatatcgcgacgccctccggatcccgagttcc gtgcagcgcaagagggacaagtccctccctgcctga

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