Lichenicola cladoniae: HN018_10055
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Entry
HN018_10055 CDS
T07054
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
lck
Lichenicola cladoniae
Brite
KEGG Orthology (KO) [BR:
lck00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lck03016
]
HN018_10055
Enzymes [BR:
lck01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
HN018_10055
Transfer RNA biogenesis [BR:
lck03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
HN018_10055
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
QKE90334
UniProt:
A0A6M8HPK2
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All DBs
Position
complement(2164798..2165451)
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AA seq
217 aa
AA seq
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MSVTQFMPNATIHLHQGDLPDGISLGASVAVDTETMGLEPHRDRLCLVQLSAGDGTAHLV
QIIPSRLGGHGADCPNLKRLMSDTGVVKLMHFARFDVAILQHALGITVAPIKCTKIAAKL
VRTFTDRHGLAQLSRELLGVEMSKQQQTSDWGARDLSPEQLAYAASDVLHLHALWSRLEA
LLIREQRLDLAEACFAFMPARARLDLLGYEVPDIFAH
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtcacgcaattcatgccgaacgcgacgatccacctgcatcagggcgaccttccg
gacggcatctctctcggtgcctccgttgccgtcgataccgagaccatgggtctcgaaccg
caccgcgaccgtctctgtctggtgcagctctccgccggcgacggcaccgcgcacctggtc
cagatcataccatcccggctgggtggacatggcgccgactgtccgaacctgaagcggctg
atgtctgataccggcgtggtgaagctgatgcatttcgcacggttcgacgtggccatcctt
cagcatgcactcggcatcacggtagcgccgatcaagtgcacgaagatcgccgccaagctg
gtgcgcaccttcaccgaccggcacggcctcgcccagttgtcgcgcgaactgctcggcgtc
gagatgagcaagcagcagcagacctccgactggggcgcacgcgacctctcgccggaacaa
ctggcctatgctgcatcggacgtcctgcacctgcatgcactgtggtctcgcctggaagct
ctgctaatacgcgaacagcggctcgatctggccgaggcctgcttcgccttcatgccggcc
cgcgccaggctcgacctgctgggctacgaggttccggatatcttcgcgcactga
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