Lichenicola cladoniae: HN018_10645
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Entry
HN018_10645 CDS
T07054
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
KO
K03666
host factor-I protein
Organism
lck
Lichenicola cladoniae
Pathway
lck02024
Quorum sensing
lck03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lck00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HN018_10645 (hfq)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HN018_10645 (hfq)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lck03019
]
HN018_10645 (hfq)
03036 Chromosome and associated proteins [BR:
lck03036
]
HN018_10645 (hfq)
Messenger RNA biogenesis [BR:
lck03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
HN018_10645 (hfq)
Chromosome and associated proteins [BR:
lck03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
HN018_10645 (hfq)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
Hfq_1
LSM
Motif
Other DBs
NCBI-ProteinID:
QKE90430
UniProt:
A0A6M8HQ70
LinkDB
All DBs
Position
2293224..2293532
Genome browser
AA seq
102 aa
AA seq
DB search
MAKDNSQNVQDVFLNHVRRSKTPVTIFLVNGVKLQGIITWFDNFSVLLRRDGHTQLVYKH
AISTVMPAAPIALFDQNKVEGGVAVPAGAETEQEVALMKSIV
NT seq
309 nt
NT seq
+upstream
nt +downstream
nt
atggctaaggacaactcgcagaacgtgcaggacgtatttctcaatcacgtccgtcgttcc
aagactccggtgacgattttcctggtcaacggcgtcaagctccaggggatcatcacctgg
ttcgataacttctcggtcctgttgcgtcgggatgggcacacccagctcgtctacaagcac
gccatcagcaccgtgatgccggcggcgccgatcgccttgttcgatcagaacaaggtcgag
ggtggcgttgccgttcccgccggcgccgagaccgagcaggaagtggcgctgatgaaaagc
atcgtctga
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