Lichenicola cladoniae: HN018_11240
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Entry
HN018_11240 CDS
T07054
Name
(GenBank) class I SAM-dependent RNA methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
lck
Lichenicola cladoniae
Brite
KEGG Orthology (KO) [BR:
lck00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lck03009
]
HN018_11240
Enzymes [BR:
lck01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
HN018_11240
Ribosome biogenesis [BR:
lck03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
HN018_11240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRM5-TYW2_MTfase
Motif
Other DBs
NCBI-ProteinID:
QKE92599
UniProt:
A0A6M8HVH1
LinkDB
All DBs
Position
2421107..2422411
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AA seq
434 aa
AA seq
DB search
MANPSFTARIDSLGIEGDGVSRERGAPVHVRYALGGETVSARTIGRGRATATEILSPSPD
RVVPPCSLFFECGGCVLQHLDRAALLSWKTGLVGDALRNAGFTVPAGIKATQSPPRTRRR
MDMAVRRGPDGVIVGLHVRGSDEVIALTECHVLIPQLFTLIAPLQAVLTRLQGLRRIGSA
SVNLLDSGPDILLSSDAPLVPRDRTILAEFALTNGVPRIAWQLEGGRAVPETICSIAPAT
HSFSGATLSPPTGTFLQATIEGEHAITDAVLAALPARLPRSARVVELYAGCGTISFPLSE
RARVIAYEGNPLSVGCLRTAGAGRRVEVHLRDLNRQPVMARDFAGATAIVLDPPHSGAGA
QARELATSGVPNIIYVSCNPTALAQDAKLLADAGYKLQQVTVIDQFLWSARAESVSLFTK
TIATRRGPLVRPPR
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacccgtccttcaccgcccggatcgacagcctcggcatcgaaggtgacggcgtc
tcccgcgagcgcggcgcacccgtccatgtccgctacgcgctcggcggcgagacggtgtcc
gcacgcaccatcggccgcggtcgcgcgaccgcaaccgagatcctgtcgccaagccccgac
cgtgtggtgcctccctgcagcctgttcttcgaatgcggcggctgcgtgctgcagcacctc
gaccgggccgcattgctatcctggaagaccggcctggtcggcgacgcactgcgcaatgca
ggcttcaccgtccccgccggtatcaaggccacgcagagcccgccgcgcacccggcgccgg
atggatatggctgtgcgtcgtggtccggacggcgtcattgtcggcctgcacgtgcgaggc
agcgacgaggtcatcgcactgaccgagtgccacgtcctgatcccgcaactgtttacgctg
atcgccccgctccaggccgtgctcacccgcctgcaggggctccgccgcatcggatcggcc
agtgtgaacctgctcgatagcggcccggacatcctgctgtcgtccgatgcgccgctggtg
ccgcgcgaccgcaccatcctggccgagttcgcgttgacgaacggcgtgccgcgtatcgcc
tggcaactcgaaggcggccgcgccgtccccgaaacgatctgcagcatcgctccggcaacc
cacagcttcagcggcgccaccctctccccaccgaccggtacatttctgcaggcgaccatc
gaaggggagcatgcgatcaccgatgcggtgctggctgcactccccgcacgcctcccacgc
agcgcgcgcgtggtcgaactctatgccggctgcggcaccatcagcttcccgctatcggaa
agggcccgggtaatcgcctacgagggcaatcccctgtcggtcggttgccttcgtaccgcc
ggagccgggcggcgggtcgaggtgcatctgcgcgatctcaaccgccagccggttatggcg
cgcgacttcgccggtgccaccgcaatcgtactcgacccaccgcattcaggcgccggcgcc
caggcgcgcgaacttgcgacctccggcgtgccgaacatcatttacgtgagctgcaacccg
accgccctcgcgcaggacgccaagctcctcgccgacgccggatacaagctgcagcaggtt
acggtgatcgatcagtttctatggtcggcccgggcggagagcgtcagcctgttcaccaag
accatcgcgacccgacgtgggccgctggtgagaccgccgcggtaa
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