KEGG   Lichenicola cladoniae: HN018_11890
Entry
HN018_11890       CDS       T07054                                 
Symbol
tssM
Name
(GenBank) type VI secretion system membrane subunit TssM
  KO
K11891  type VI secretion system protein ImpL
Organism
lck  Lichenicola cladoniae
Pathway
lck03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:lck00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    HN018_11890 (tssM)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:lck02044]
    HN018_11890 (tssM)
Secretion system [BR:lck02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   HN018_11890 (tssM)
SSDB
Motif
Pfam: IcmF-related_N IcmF-related IcmF_C IcmF_helical nSTAND_NTPase5
Other DBs
NCBI-ProteinID: QKE90641
UniProt: A0A6M8HQY8
LinkDB
Position
complement(2571290..2574901)
AA seq 1203 aa
MNENLQNLGAVLLGRWTMSFAGLAIAGTIAWYLGPLIPGLSSTLSRALLILLFVLVWAIV
NGILTWRRRRRGRALAKGVVDGGEAAARRSGRTEENEEVGRLRDRLRTSLAVLRKAQGRR
GTLYEQPWFLMIGPPGAGKTTALTQCGLRFPLAQPDGTGGLSPGSVAGVGGTRLCDWWFA
DEAVLIDTAGRYTTQDSDESVDRAGWLGFLDLLKRTRPRQPLNGVLVVISLADVATVPAA
ERLSHARAIRSRIKEASDRLGVRLPVYAVFSKTDRIAGFTEFFDDLDQQARQQVWGMTFP
LAKGVEIFTHEFQLLVERLDSRLYERLQAERSPDRRVAIAGFPLQIASLEAPLTEFLQAA
FGGTKLDRAPMLRGVYFSSGIQEGTPIDRLTGLLARTFGIDQKRAPSLRPVAGRSYFLGR
TIRDVILGEALLVSVNPAAIRRRRIWRWGGFSTVGVVTLVACLLLWRDASINRAAIARDQ
GAIDAYARTLTGIPLDPVADDDLIRVLPVLDSARMLPGNDGGPIGLTRSRFGIGQQDKLS
ETDRLAYRHALERVLLPRMIWRIEGQMRSHLDRPEFLYEATRVYLMLGNDGPLDPNLVRD
WMVLDWASRYPGPVMQPDRDALLRHLNALLAGPLPTVALDGALVQEARSTFSRVSPAERI
YSRVRPGAAAVAVPPWSPASVLGANVDGQMFNRLSGKPLTETIPGFYTAEGFRSVLLPAL
SAAVREVADESWVLGRPDEAAAPNASTQSLQALEAGVISLYAADYERLWDAMLGDLALVP
FQSHADAVQKLYVLASPQSPMRDLLVSIVHELAPARMAAQADSHAKPGAPKGPTDSQGSR
LAAMFDQRTADGGQVLPPGHEIDDHYRTLIDFTGPTGQAPPITGVFRLLNQLQSELAQLP
GAESPSSVLQGSQDPAQLLLAEARRQPPPVSRWLHQVSAGGAAMVGGDAHQAAAAAFTGS
EGPSKLCHQVVDGHYPFDPTSTADAPIDDFVKLLAPGGALDAYFKTQLRPYVNTSGTTWH
AQSLGGVPAPITDASVAAFQQAALIRDLFFPTGGTTPSVHFTIKPVSADPVSKQVVLMLG
QNSVSWNASVPPAPVKPGAGKPVAPVSTPPTVHSLSVTWPADALNEVGLTYHPDASFPVH
AEGPWALFRLLSSASIEKSDEPGHFFIHFRSGAREATFSVETGSAESPLDQSVLQSFRCP
VVQ
NT seq 3612 nt   +upstreamnt  +downstreamnt
atgaacgagaacctgcagaatctgggagcggtcctgctgggccgctggaccatgagcttt
gccggcctggcgatcgccggcaccatcgcctggtatctcggcccgctgatccccgggctg
agcagcaccctgtcgcgcgcgttgctgatcctgctgttcgtgctggtgtgggcgatcgtc
aacggcatcctcacctggcgccgtcgccgccgtgggcgcgccttggcaaagggcgtcgtc
gacggcggcgaggccgcggcgcgtcgctccggccgcaccgaggagaacgaggaagtcggg
cggctgcgcgatcggctgcgtacctcgctggccgtgctccggaaggcgcagggccgtcgc
ggcacgctctacgagcagccctggttcctgatgatcggcccgcccggcgcggggaaaacc
accgcgctgacccagtgcggcttgcgctttccgctggcccagccggacggcaccggcggg
ctgtcgcccggttcggtcgccggcgtcggcggtacccgactatgcgactggtggttcgcc
gacgaggcggtgctgatcgacaccgccggccgctacaccacccaggattccgacgagagc
gtcgatcgtgccggctggctcggttttctcgacctgctgaagcgcacccgtccgcggcag
ccgctcaacggcgtgctggtggtgatctcgctcgccgacgtcgccactgtcccggccgcc
gaacggctgagccatgcccgcgccatccgcagccggatcaaggaagcgtccgaccgcctt
ggcgtaaggcttccggtctatgcggtgttcagcaagaccgaccgcatcgccggttttacc
gagttcttcgacgatctcgaccagcaggcgcgccagcaggtctggggcatgacattcccg
ctggccaagggcgtcgagatcttcacgcacgagttccagctgctggtcgagcgcctggac
agccgtctctacgaacggctgcaggcagagcgcagcccggaccggcgagtggccattgcc
gggttcccgctgcagatcgccagtctcgaggcgccgctcaccgagttcctgcaggcggcg
ttcggcggtaccaagctcgatcgcgcgccgatgctgcgcggcgtctatttcagctccggc
atccaggaaggcacgccgatcgaccggctgaccggcctgctggcccgcaccttcgggatc
gaccagaagcgcgcgccgagcctgcgcccggttgccggccggtcctacttcctcggccgc
accatacgcgacgtcattctgggcgaggcgctgctggtgtcggtcaacccggccgccatc
cgccgccgccgcatctggcgctggggcggtttctccaccgtcggcgtggtgacgctggtg
gcatgcctgctgctgtggcgcgacgcctcgatcaaccgggccgcgatcgcccgcgaccag
ggcgccatcgacgcctatgcgcgcaccctgaccggcattccgctcgacccggtcgccgac
gacgacctgatccgggtgctgccggtgctggattccgcccgcatgctgcccggaaacgat
ggcgggccgatcggcctgacccgctcgcgcttcgggatcggccagcaggacaagctgagc
gagaccgaccggctcgcctaccggcatgccctggagcgggtgctgctgccgcgtatgatc
tggcgcatcgaggggcagatgcgcagccatctcgatcgcccggaatttctctatgaagcc
acccgcgtctacctgatgctcggcaacgacggaccgctcgatcccaacctcgtacgggac
tggatggtgctggactgggccagtcgttatcccggcccggtcatgcagcccgatcgcgac
gcgttgctgcgccacctgaacgcgttgctggccggtccgctgccgaccgtggcgctcgac
ggcgccctggtgcaggaagcccgcagcaccttcagccgcgtctcacccgccgagcgcatc
tacagccgggtacgtccgggtgcagcggcggtcgccgtgccgccctggtcgccggcctcg
gtgctgggcgccaatgttgacggccagatgttcaaccgcctgtccggcaagccgctcacc
gaaaccattcccggcttctatacggcggagggcttccgcagcgtgttgctgccggccctc
agtgccgccgtacgcgaggtcgccgacgaaagctgggtgctcggtcgtcccgatgaggca
gctgcgccgaacgccagcacccagtccctgcaggcgctggaagccggggtgatctcgctc
tatgccgccgactacgagcggctatgggatgcgatgctgggagacctcgcgctggtgccg
ttccagagtcacgccgacgcggtgcagaagctctatgtcctggcctcgccgcaatcgccg
atgcgcgacctgctggtgtcgatcgtgcatgaactggccccggcccggatggccgcccag
gccgactcccatgccaagccgggtgcccctaaaggcccaaccgactcccagggcagccgg
ctcgccgcgatgttcgaccagcgcaccgccgacggtggccaggtgctgccgcccggccac
gagatcgatgatcattatcgcaccctgatcgacttcaccggaccgacgggacaggcaccg
ccgatcaccggcgtgttccgcctgctcaaccagctgcagagcgaactggcccagcttccc
ggcgccgagagcccgtcgagcgtgctgcaggggagccaggatccggcgcagctgctgctg
gccgaagcccgccgccagccgccgccggtctcccgctggctgcaccaggtttccgccggc
ggtgccgcgatggtcggaggcgacgcgcaccaggccgccgccgccgccttcaccggcagc
gagggaccgtccaagctctgccaccaggtggtcgacgggcattacccgttcgatcccacc
tcgaccgcggacgcgccgatcgacgatttcgtgaagctcctggcccccggcggcgcgctc
gacgcatacttcaagacccagttgcggccgtacgtgaacaccagcggcaccacctggcac
gcgcagtcgcttggcggggttccggcgccgatcaccgatgcctcggtggccgccttccag
caggccgcgctcattcgcgacctgttcttcccgaccggcggcaccaccccctcggtgcac
ttcaccatcaagccggtctcggccgatccggtctcgaagcaggtggtgctgatgctgggc
cagaactcagtgagctggaatgcatcggtgccgcctgcgccggtgaagccgggtgccggc
aagcccgtcgcgccggtctccacgccgccgaccgtgcatagcctcagcgtcacctggccg
gccgacgcgctcaacgaggtcgggctgacctaccatccggacgcctcgttcccggtgcat
gccgaaggtccgtgggcattgttccggctgctgagcagcgccagcatcgagaagtcggac
gaacccgggcacttcttcatccacttccgctccggtgcccgcgaggcgaccttctcggtc
gagaccggctcggccgagagcccgctcgaccagagcgtgctgcagtccttccgctgcccg
gtcgtccagtga

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