KEGG   Lichenicola cladoniae: HN018_11965
Entry
HN018_11965       CDS       T07054                                 
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
  KO
K11900  type VI secretion system protein ImpC
Organism
lck  Lichenicola cladoniae
Brite
KEGG Orthology (KO) [BR:lck00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:lck02044]
    HN018_11965 (tssC)
Secretion system [BR:lck02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   HN018_11965 (tssC)
SSDB
Motif
Pfam: VipB VipB_2
Other DBs
NCBI-ProteinID: QKE90655
UniProt: A0A6M8HQV6
LinkDB
Position
complement(2593229..2594716)
AA seq 495 aa
MSQTTTPNTGASKAVETNDLLQQVVSATRQTEPDRAQDLVRALVEQAEAGTIKFDRNLNR
TIERAIAEIDKKLSDQLNEIIHDPRFLKLEGSWRGLHYFVMNSETGTMLKIRLLNASKRD
LNRDLTRVVEFDQSLLFRKIYENEFGTPGGEPYGALIGDYEWGNHPDDIETLRLISNVSA
AAFAPFISAAGANMFGFDSWTELSKPRDLAKIFDTVEYQKWRGFRDSEDSRFVSLVMPRV
VARLPYGALTKPIDEFDYEEAPLDVAGKALSMDHDQYCWMNAAYVMGTRLTDAFSKHGFC
TAIRGAEGGGKVDNLPTHIFQSDDGDLDAKCPTEIGITDRREYELSNLGFLPLCHYKNHD
FAVFFGAQTAQKAKEYDRPDATANARISARLPYIMATSRFAHYLKVMARDKIGSFMEAED
CEIWLNRWIKNYVNTNENAGPDSKAKYPLREARVEVREIPGRPGAYNAIAYMRPWLQMEE
LTTSLRMVARIPEKA
NT seq 1488 nt   +upstreamnt  +downstreamnt
atgtcgcaaaccacaacacccaacaccggcgcttcaaaagccgttgagaccaacgacctc
ctgcagcaggtcgtgtcggccacccgccaaaccgagcccgatcgggcgcaggacctggtt
cgggcactggtcgagcaggccgaggccggcaccatcaagttcgatcgcaacctcaatcgc
accatcgagcgggcgatcgccgagatcgacaagaagctgtccgaccagctgaacgagatc
atccacgatccgcggtttctgaagctcgagggaagctggcgcggcctgcattacttcgtg
atgaacagcgaaaccggcacgatgctcaagatccggttgctgaacgcgtcgaagcgcgac
ctcaaccgcgacctgacccgcgttgtcgaattcgaccagagcctgctgttccgcaagatc
tacgagaacgaattcggcacgcccggcggcgagccatatggcgcgctgatcggcgactac
gaatggggcaaccacccggacgatatcgagacgctgcggctgatttccaacgtcagcgct
gccgcgttcgcaccgttcatctcggctgccggcgccaacatgttcggcttcgacagctgg
accgaattgtccaagccacgcgatctcgccaagatcttcgatacggtcgaatatcagaag
tggcgcggcttccgcgacagcgaggatagtcgcttcgtttccctggttatgccgcgcgtc
gtggcacgactgccgtacggcgcgctgaccaagccgatcgacgagttcgactacgaagaa
gcgccgctcgatgtcgcgggcaaggcgctcagcatggatcacgaccagtattgctggatg
aacgccgcctacgtgatgggcacgcgcctgaccgatgcgttctccaagcacgggttctgc
accgcgatccgcggtgccgaaggcggcggcaaggtggacaacctgcccacccatatcttc
cagtccgacgacggcgatttggacgcgaagtgcccgacggaaatcggcatcaccgaccgc
cgcgagtacgagctgtccaacctcggcttcctgcccctgtgccactacaagaaccacgat
ttcgcggtcttcttcggtgctcagacggcgcagaaggccaaggagtacgaccgcccggac
gcgaccgccaacgcccgcatctcggcacgcctgccctacatcatggcgaccagccggttt
gcgcattacctgaaggtgatggcgcgcgacaagatcggctcgttcatggaggccgaggat
tgcgagatctggctgaaccgctggatcaagaactacgtcaacaccaacgagaacgccggt
cccgacagcaaggcaaaatatccgctgcgtgaagcacgcgtagaggtgcgggagatcccc
ggccgcccgggtgcgtacaatgcgatcgcatacatgcggccgtggctgcagatggaagag
ctgaccaccagcctgcgcatggttgcccgtattccggaaaaagcgtga

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