KEGG   Lichenicola cladoniae: HN018_11980
Entry
HN018_11980       CDS       T07054                                 
Symbol
tssH
Name
(GenBank) type VI secretion system ATPase TssH
  KO
K11907  type VI secretion system protein VasG
Organism
lck  Lichenicola cladoniae
Pathway
lck03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:lck00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    HN018_11980 (tssH)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:lck02044]
    HN018_11980 (tssH)
Secretion system [BR:lck02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   HN018_11980 (tssH)
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA AAA_5 ClpB_D2-small AAA_16 AAA_22 Sigma54_activat AAA_7 Zeta_toxin nSTAND3 NACHT SRP54 ResIII AAA_25 AAA_18 DUF815 Torsin TIP49
Other DBs
NCBI-ProteinID: QKE90658
UniProt: A0A6M8HQM6
LinkDB
Position
2596809..2599469
AA seq 886 aa
MAAIDLSLLVARLNGTCRRALEAAAGLTLSRTHYNVEIEHWLLQLVGTAGTDIPVLLRHV
DIDEGRLTADLQSTLDGMKTGNGRAPALAPEIVSLMKQAWLLASVERNAASIRSADLLMA
LLADEALSQGLRRTLPRLFRIETAVDRAALPRILRDSSETAGDAPLGEAAAAPPGDVAAG
AARAASPALAQFTIDLTAQAREGRIDPILGRDAEIRQLVDILTRRRQNNPILVGEAGVGK
TAVVEGLALRIAQADIPPALADVSILTLDLGLLQAGAGVKGEFENRLKAVIREVQASPSP
VILFIDEAHTLIGAGGSAGSGDAANLLKPALARGELRVIAATTWAEYKKYFEKDAALTRR
FQPVTIAEPDEPTAIAMIRGLVATLEAHHGIPILDEAVDAAVRLSARYIPSRQLPDKAVS
LLDTACARVAMSQSASPPAVENAERRLGLIDTERNGLHREAALGTRHDDRLAALDAEHQA
VSLDHAALTSRWQAEREVVASLHALRALMLEPAVARDGAPSMDLDAVRADYGEQRARLQA
LQGEQPLVFPVVDAQAVAEIVAAWTGIPTGRMQSDEIRTILDLDAAMGRRIVGQDHALQA
VAQAIRTSRAGLTDPRKPIGVFLMVGTSGTGKTETALALAELLYGGEQNLTVINMSEFKE
EHKVSLLMGSPPGYVGYGEGGVLTEAVRRRPYSVILLDEMEKAHPGVQDVFYQVFDKGQM
KDGEGRDIDFKNTVIIMTSNAGSDVLAQLYADPETAPESSALAGLLHEPLLKVFKPAFLG
RTKLIPYVPLNDETLRRIAVLQLERVRKRFRDRFGADLLFDGAIVDLLAARCAESSAGAR
AIEGILSDTLLPDLATAVLTRMVDNIAVEKILVEVDNAGSFRYSLT
NT seq 2661 nt   +upstreamnt  +downstreamnt
atggccgcaatcgacctgtcgctgctcgtcgcacgactgaatggcacgtgccgcagggcg
cttgaagcagccgcgggactgacgctgtcccgcacgcactacaatgtcgagatcgagcac
tggctgctgcaactggtaggaaccgccggcacggatattccggtgctgttgcgtcacgtt
gatatcgacgaaggccggctgactgcggatctgcagtcgacgctggacgggatgaagacc
ggcaacggacgtgccccggcgctggcgccggaaatcgtgtcgctgatgaaacaagcctgg
ttactggcctcggtcgagcgcaatgcggcctcgatccgctcggcggacctgctgatggcg
ctgctggccgacgaagcgctgtcacagggtctgcgcaggaccctgcctcggctgttccgg
atcgagactgcggtggaccgtgcggcgctgccccggatcctccgtgacagcagcgagacc
gcgggggatgcaccgctcggtgaggctgcggccgcgcctccgggcgacgtggctgccggc
gccgcacgcgctgcatcgcccgcactcgcgcagttcaccatcgacctcactgcgcaggcc
agggagggccggatcgacccgatcctcggtcgtgacgccgagatccgccagctggtcgat
atcctgacccggcggcgccagaacaacccgatcctggtcggcgaggccggcgtcggcaag
acggcggtggtcgagggactggcgctgcggatcgcccaggccgatatcccgcccgccctg
gccgatgtcagcatactcaccctcgatctggggctgctgcaggccggagccggggtgaag
ggcgagttcgagaaccggctgaaggcggtcatccgcgaggtacaggcgagcccgtcgccg
gtgatcctgttcatcgacgaggcgcatacgttgatcggcgccggcggcagtgccggatcg
ggcgacgccgccaatttgctgaagccggcgctggcgcggggcgaattgcgggtgatcgca
gccaccacctgggccgaatacaagaaatatttcgagaaggatgccgccctcacccggcga
ttccagccggtgaccatagccgaacccgacgagccgaccgcaatcgcgatgattcgcggc
ctggtggcgacgctggaggcgcatcacggcatcccgatcctggacgaagccgtggacgcc
gccgtgcggctgtcggcgcgctatatcccgagccggcagttgccggacaaggcggtcagc
ctgctcgataccgcctgcgcgcgggtggcgatgagccagtccgcctccccgcctgcggtc
gagaacgccgagcggcggctcggtctgattgataccgagcggaatggactgcaccgcgag
gctgcactcggtacgcgtcacgacgatcgcctggcggcgctggatgccgagcaccaggcg
gtgtccttggatcatgcggcgctgaccagccggtggcaggcggaacgggaggttgtggcc
tccctgcacgccctgagggccctgatgctggagccggcggttgcccgggacggcgcgcct
tcgatggacctggacgcggtgcgcgccgactatggcgagcagcgtgcccgtctgcaggcg
ctgcagggcgagcagcctctggtgttcccggtggttgatgcgcaggcggtggccgagatc
gtcgccgcctggaccggcatcccgacgggccgcatgcagtccgacgagatccgcacgatc
ctcgacctcgatgcggcgatgggccgacgcatcgtcggacaggatcatgcgctgcaggcg
gtggcccaggcgatccggacgtcgcgggccggacttaccgatccgcgcaagccgatcggt
gtatttctgatggtgggcacgtccggcaccggcaagaccgagacggcgctggcgctggca
gagctgctgtatggcggcgagcagaacctgacggtgatcaacatgtccgagttcaaggag
gagcataaggtcagcctcctgatgggcagcccgccaggctatgtcggctacggcgaaggc
ggcgtgctgaccgaggcggttcgccggcggccctattcggtcatcctgctggacgagatg
gagaaagcccatccgggcgtgcaggacgtgttctaccaggtattcgacaaaggccagatg
aaggacggcgaaggccgcgacatcgacttcaagaacaccgtcatcatcatgacgtcgaat
gcgggcagcgacgtgctggcgcagctgtatgcggatccggaaaccgcaccggagtcgtcg
gcgctcgccggccttctgcatgaacctttgcttaaagtgttcaagccggctttcctcggg
cggacgaaattaataccgtatgttccgttgaacgatgaaacgctgcgcaggatcgcagtt
ctacagctcgagcgtgtccggaaacggttccgagatcgtttcggtgcggacctgttgttc
gatggcgcgattgtcgatctgcttgcggcacggtgtgccgaaagcagcgccggggcgcgg
gcgatagagggcattctgtccgatacattgcttcccgatctggcaactgccgtcctgaca
cggatggtggacaatatcgcagtcgagaagatactcgtcgaagtggacaatgcgggctcg
tttcgctactcgctgacataa

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