KEGG   Lichenicola cladoniae: HN018_12880
Entry
HN018_12880       CDS       T07054                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
lck  Lichenicola cladoniae
Brite
KEGG Orthology (KO) [BR:lck00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lck03400]
    HN018_12880
Enzymes [BR:lck01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     HN018_12880
    5.6.2.6  RNA 3'-5' helicase
     HN018_12880
DNA repair and recombination proteins [BR:lck03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    HN018_12880
SSDB
Motif
Pfam: DEAD_assoc Lhr_WH DEAD Helicase_C ResIII DUF2064 PSD4
Other DBs
NCBI-ProteinID: QKE92629
UniProt: A0A6M8HVK1
LinkDB
Position
2810961..2813600
AA seq 879 aa
MATRRLRTSNRTEVAIVASPASKLPARFAAWFAKRGWAARPHQLAVLEAVASGTDVLLVA
PTGGGKTLAGFLPSLVELADTGERDILHTLYISPLKALATDIARNLTAPVEEMGLAIRIE
TRTGDTPADRRARQREHPPDILLTTPESLVLLLSRRDAPAMFAGLRTIIIDEVHALAGLK
RGDQLALCLARLSMLAPGARRIGLSATVAHPEALRAYVGLPDRPARLIEAPPGAPPSLAI
MLPDARVPWSGRMGIAGASVILERIAASGMTIVFVNTRAQAELLFAAIWRINDDTLPIAL
HHGSLDIGQRRKVEAAMARGPDAKDGLRGVIATSSLDLGIDWGGVDQVIQVGAPKGVSRL
LQRVGRANHRMDEASDAILVPANRFEVLECQAAILGVQAMELDGEAPRPGGLDVLAQHVL
LMAASAPFTEQALYDEVRRAAPYAGLSRRDFEDVVGFVEDGGYALVAYERYRKLFRDSEG
LIQIRGERVARQARMNAGTIVESPVLKVRLGGARGFNLGEIEESFANMLSPGDAFIFAGR
TLAFTRLHEGAVEVTEGARGQPLVPTYAGSKYPLTSGLAARVRQMLHDPAAWALYPEPVR
EWLQLQQERSVLPGPDDLLVEIFPRHGRFFVVAYCFEGRNAHQTLGMLLTRRLSREGAAP
LGFVATDYAIALWCANPPRDIPALFAADMLGDDLEAWMAESSMLRRTFRNVAVIAGLIER
QHPGQTGTRKQVTVNSDLVYDVLRRHQPDHVLLRATRAEAAGGLTDVDRLADMLLRVEGH
IKVARLERVSPLAIPVMLDIGREFVRSSEDEDALLEETETLLAEAMGEAEPSTEELVLAP
GHAQELRRLTRTSGQRTTRPDRAARGRSRSQPRTKPVSP
NT seq 2640 nt   +upstreamnt  +downstreamnt
atggccacccggagactacgcaccagcaaccggacagaagtcgccatcgttgcaagcccg
gcctcgaagctgccggcccggttcgccgcttggttcgccaaacgcggttgggcggcacgg
ccgcatcagcttgcggtgctggaagccgtcgcgagcggaacagacgtattgctggtggca
cccacgggcggcggcaagacgctggcgggcttcctgccgagcctggtcgagctcgcggat
accggcgagcgggatatcctgcacaccctctacatcagcccgctgaaggcgctcgccacc
gacatcgcgcgcaacctgaccgcgccggtcgaggagatgggattggcgatccgcatcgag
acgcgtaccggcgatacccccgccgaccggcgtgccagacagcgcgagcatccgccggat
atcctgctgaccacgccggagagcctggtgctgctgctgtcccggcgcgacgcacccgcg
atgttcgccggcctgcgaaccatcatcatcgacgaggtgcacgcactggccgggctgaag
cgcggcgaccagctggcgctgtgcctggcgcggctgtcgatgctcgcgccgggcgcgcgc
cggatcgggctgtccgcgacggtggcgcatccggaggcattgcgcgcgtatgtcggcctg
cccgaccggccggcgcggctgatcgaggccccgcccggcgcgccgccgtcgctggcgatc
atgctaccggacgcacgggtgccgtggtcgggacggatgggcatcgccggcgcatcggtg
atcctggaacggatcgcggcgtccggcatgaccatcgtgttcgtcaacacccgtgcccag
gccgagcttctgttcgcggcgatctggcgcatcaacgatgacacgctgccgatcgccctg
catcacggcagcctcgatatcggccagcgccgcaaggtcgaagccgccatggcgcgcggc
ccggacgcgaaggacgggctgcgcggcgtgatcgccacctcgtcgctcgatctcgggatc
gactggggcggggtcgaccaggtgatccaggtgggcgcgccgaagggggtgtcgcgcctg
ctgcaacgggtcgggcgtgcgaaccaccgcatggacgaggcctcggacgcgatcctggtg
ccggcgaaccggttcgaggtgctggagtgccaggcagcgatcctcggcgtgcaggcgatg
gagctcgatggggaggcgccacggccgggtgggctcgacgtgctcgcgcagcacgtgttg
ctgatggcggcgagcgcgccgtttaccgagcaggcactctatgacgaggtcaggcgggcg
gcgccctatgccgggctgagccggcgcgatttcgaggatgtggtcggcttcgtcgaggat
ggcggctacgcgctggtggcctacgagcgctaccgcaagctgttccgggactccgagggg
ctgatccagatccgcggcgagcgggtggcgcgccaggcaaggatgaatgccggcaccatc
gtcgaatcgccggtactgaaggtccggctcggcggcgcacgtggcttcaacctcggcgag
atcgaggagagcttcgccaacatgctgagcccgggcgacgccttcatcttcgccggccgc
accctggccttcacgcggttgcacgagggtgcggtggaggtgacggaaggggccaggggc
cagccgctggtgccgacctatgccggtagcaaatatccgctgaccagcgggctggcggcg
cgggtacggcagatgctgcacgatccggcggcctgggcactctatcccgagccggtgcgc
gagtggctgcaactgcagcaggagcgctcggtgctgcccggaccggacgacctgctggtc
gagatatttccccgccacggtcggttcttcgttgtcgcctactgcttcgagggccgcaac
gcgcaccagacgctcggcatgctgctgacccgcaggctgtcccgcgagggcgcggcgccg
ctcggcttcgtggcgaccgactatgcgatcgccctctggtgcgccaacccaccacgcgat
attcctgctttgttcgcggccgacatgctgggcgacgacctggaggcgtggatggcggag
agctcgatgttgcggcggaccttccgcaatgtcgctgtcatcgccggcctgatcgagcgc
cagcatccgggccagaccggcacccgcaagcaggtcaccgtgaacagcgacctcgtctac
gacgtgctgcgccggcaccagccggaccatgtgctgctgcgcgccacgcgggcggaagcg
gctggcggcctgaccgacgtcgaccgtctcgccgacatgctgctcagggtcgagggccac
atcaaggtggcacggctggagcgggtatcgccgctggcgatcccggtcatgctggatatc
ggccgcgagttcgtgcgctcctccgaggacgaggacgctctgctggaggagaccgagacg
ctgctcgccgaggcgatgggcgaggcggagccttcgaccgaggagctggtgctggccccc
ggccatgcgcaggagctgcgccgcctcacccgcacatccggccagcgcaccacccggccg
gatcgggccgcacgtgggcgctcgcggtcgcagccacgcacgaagccggtctcgccgtga

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