Lichenicola cladoniae: HN018_15520
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Entry
HN018_15520 CDS
T07054
Name
(GenBank) ATP-binding cassette domain-containing protein
KO
K10560
rhamnose transport system permease protein
K10562
rhamnose transport system ATP-binding protein [EC:7.5.2.-]
Organism
lck
Lichenicola cladoniae
Pathway
lck02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lck00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
HN018_15520
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lck02000
]
HN018_15520
Transporters [BR:
lck02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Rhamnose transporter
HN018_15520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
BPD_transp_2
AAA_21
AAA_22
Zeta_toxin
AAA_29
Peptidase_M24
TsaE
Motif
Other DBs
NCBI-ProteinID:
QKE91267
UniProt:
A0A6M8HST7
LinkDB
All DBs
Position
3415300..3417903
Genome browser
AA seq
867 aa
AA seq
DB search
MLDGLQQAAGAGHVRDGAGAASLANVRKVFGGVVALAHADFELRPGEVLALLGENGAGKS
TCVKMLAGVHRPDEGSVRLDGKDVVLRSPHDALANGIAVMHQHPGLFPDLTVAENIAIGH
MPLTRLKQLDQRRIEADAARLLQVVGLDCAPRRSLGLLRSSEQQLVEVARALSVDARVLI
MDEPTAALSRGEVERLFAVVEQLKKRGVAMMFVGHRMEEIYRIADRVVVLRDGRQVGMAP
IGDLSPADAVTMMVGRELGTLYPTLDPPRDTIVLQADGLSRRGAFTDVSFDLHAGQILGF
GGLVGSGRTEVARVLFGIDQPTAGTIAIDGVRHAFRSAGAAMQAGVGYVSEDRLGQSLVM
DFSILDNASLTVLRQAARHGLISRDRELALVEQPLDRMNLRFSSYDQPVSTLSGGNQQKV
VLAKWLATAPRVLILDEPTQGIDVNAKAEVHAIIADLARGGMAIILISSEMPELLGMCHD
ILVFREGHVSARMQGKDATQQSVLLAATDAAGAARKTSAADAVAGATDAVQAARHDPAVR
PPAPRRSLFRREFGLVAAIVAMIVPATLINPRMLSLANIDAVAMDLALLIIVAAGQMLVM
ITRNIDLSVASVIGLSAYLCADALHRFPGLPLAGAVAIAGLVGLGCGIVNGLVVTRGRVP
SIVVTLGTLSLYRGLCSMIAGGRQISTEQVPQAWLDMTAIHVLGIPVILIAAAVALALLA
AILQRLPQGRELFAVGSNPAGARLIGISSDRLVLGAFACAGLLAGLDGALWASRYATVDA
RVASGYELTVIAAVVVGGTAIRGGAGTITGIVLGALMLLVIQNGLTLVRVNPLWLQGVYG
LVIVLAISLDAFVSRRALRSVTERTAR
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atgttggacggtctgcaacaggcagccggagccggtcacgtgcgtgacggtgccggcgcg
gcgtccctggcaaatgtcaggaaggtgttcggtggcgtcgtggccctggcccacgccgac
ttcgaactacgcccgggcgaagtcctggcgcttctcggtgagaacggcgccggcaaaagc
acctgtgtgaagatgctggcgggcgtgcatcgccccgacgagggcagcgtccgtctcgac
ggcaaggacgtcgtgcttcgcagcccgcacgatgccctggccaacggcatcgccgtcatg
caccagcacccaggcctgtttcccgatctcaccgtggccgagaacatcgccatcggccac
atgccgctgacccggctgaaacagctcgaccagcgacggatcgaagccgacgccgcgcgg
ctgctgcaggtggtggggctcgattgcgcaccgcgccggtcgctcggcctgctgcgcagt
tccgaacagcagctggtcgaagtggcgcgtgccctgtcggtcgatgcgcgcgtgctgatc
atggacgaaccgaccgcggccctgtcgcgcggcgaggtcgagcggctgttcgccgtcgtc
gagcagctgaagaagcgtggcgtggcgatgatgttcgtcggccaccgcatggaggagatc
taccgcatcgcggatcgcgtggtggtgctccgcgatggccgccaggtcggaatggcgccg
atcggcgacctcagtccggcggacgcggtcaccatgatggtcgggcgcgagctcggcacg
ctgtatccgaccctcgacccgccccgcgacacaatcgtgctgcaggcagacggcctgtcg
cggcgcggcgccttcaccgacgtctcgttcgatctgcatgcaggccagatcctggggttc
ggcggcttggtcggcagcggccggaccgaggtggcccgcgtgctgttcggcatcgaccag
cccaccgccggcacgatcgcgatcgacggggtgcggcacgccttccggtccgccggcgcc
gccatgcaggcgggcgtcggctacgtgtcggaagaccggctgggccagagcctggtgatg
gatttcagcatcctggacaatgcgtcgctcaccgtgctgcggcaggcggcgcgacacgga
ctgatcagccgggatcgcgagctggccctggtcgagcagccgctggaccggatgaacctg
cgcttcagcagctacgaccagccggtcagcaccctgtccggcggcaaccagcagaaggtg
gtgctggcgaagtggctggcgaccgcgccgagggtgctcatcctggacgagccgacccag
ggcatcgacgtcaacgccaaggcggaagtgcacgccatcatcgccgacctcgcacgaggc
ggcatggcgatcatcctgatctcgtccgagatgccggagctgctcggcatgtgccacgac
atcctggtgttccgcgaagggcacgtgtcggcgcgcatgcaaggcaaggacgcgacccag
caatcggtgttgctggcggcgacagatgcggcgggagccgccaggaagacgagcgccgcc
gacgcggtggcgggtgcgacggacgcggtgcaggcagcgcggcacgatccggctgtccgc
ccgccggcaccgcgccgcagcctgttccggcgcgaattcggcctggtggcggcgatcgtc
gcgatgatcgtgccggcgaccctgatcaatccgcgcatgctgagcctggccaacatcgat
gcggtggcgatggacctggcgctgctgatcatcgtcgcggccggccagatgctggtgatg
atcacccgcaacatcgacctgtcggtggcctcggtgatcgggctctcggcctatctctgc
gcggacgcgctgcaccggttcccgggacttccgctcgccggtgcggtggcgatcgccggc
ctggtcgggctgggctgcggcatcgtgaacgggctggtggtcacccgcggccgggtgccg
tcgatcgtggtgacgctcggcacgctgtccctctaccgaggcctgtgcagcatgatcgcc
ggcggtcgccagatcagcaccgagcaggtgccgcaggcctggctcgacatgaccgcgatc
cacgtcctcggcatcccggtcatcctgatcgccgcggcggtcgcgctggcgctgctggcg
gcgatcctgcaacgcctgccgcaggggcgggaattgttcgcggtcggctccaatcctgcc
ggtgcccgcctgatcggcatcagcagcgaccggctggtcctgggtgcgttcgcctgcgcc
ggactcctggccgggctggacggcgcgctgtgggcctcccgctatgcgaccgtcgatgcc
cgggtcgccagcggctacgaactgacggtgattgcggccgtggtggtcggcggcaccgcg
atccggggcggtgccggcaccatcaccgggatcgtgctcggtgcgctgatgctgctggtg
atccagaacgggctgacgctggtgcgggtcaatccgctgtggctgcagggcgtatacggc
ctggtcatcgtgctggcgatctcgctcgacgccttcgtctcccgccgggcattgcgctcc
gtcaccgaaaggaccgcacgatga
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