Lichenicola cladoniae: HN018_16195
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Entry
HN018_16195 CDS
T07054
Name
(GenBank) response regulator
KO
K10715
two-component system, sensor histidine kinase RpfC [EC:
2.7.13.3
]
Organism
lck
Lichenicola cladoniae
Pathway
lck02020
Two-component system
lck02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
lck00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HN018_16195
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HN018_16195
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
lck01001
]
HN018_16195
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
lck02022
]
HN018_16195
Enzymes [BR:
lck01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
HN018_16195
Protein kinases [BR:
lck01001
]
Histidine kinases
Other
HN018_16195
Two-component system [BR:
lck02022
]
Other families
RpfC-RpfG (cell-to-cell signaling)
HN018_16195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c
Response_reg
HisKA
Hpt
PDE8A_N
6TM_PilS
B12-binding
HATPase_c_2
AmiR_N
Motif
Other DBs
NCBI-ProteinID:
QKE91380
UniProt:
A0A6M8HSQ5
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All DBs
Position
3573984..3576572
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AA seq
862 aa
AA seq
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MAEAGQAQGWTAGRVAGLRAIAQGLQARLRERPDLEHEMGFNRLIFCALIATYLWLVPSP
DMFTGLQACAVYFAFALVLITAMVLQPRISHPRRIVAMIGDLTALGTEMHISGSANAGFY
PLYLWIIFGNGFRFGLGYLFLTLGVALASFGVVVATTPYWSGKPMLSGSLLLALLVLPAY
ASGLIRKLSEAKRIAEEANRAKSRFLANVSHELRTPLNAILGSTSLLRGTPLEAEQRELT
DALDVGTRALLSLIGGILDFSRIEANRMPLRLEPFDLPDLLADIRELLGPQTRLKNLRLR
FHVTQRVPEIIRTDRRHLHEVLLNLASNAIKFTSAGEVMISVDARPCGPERLRFRFEVSD
TGIGIRQEARERIFESFTQAEPTIIDRFGGTGLGLTIARQLVTLMGGTIGVESVFGESST
FWFTIECDEVVAATTPTDQMAIPNIRVVLLCDDALMGGRIKRQLEALGLEAERASDEPDA
LARLARKPNAGVRLRTLLLLQRDSLHPAATLDEETGRFLGSADVPIIGVATLAETGPPAD
IAIRRYVGTWISQRPDPAELRAALRKVAARPEQHAEPDSVAGSNAVPKRSLHVLVADDND
INLRVVAKVLERAGHSMRLVRNGVEALDALEQERFDIVLMDVNMPVMNGIEATKLYRFAS
LGEPRVPIVALTADATQETERDCLEAGMDACLTKPIEVFRLAAALERIAHPAAPPASSQS
HRSSSAAMLPIRQVPQHPIFDDEMLDNLRTLGGEEFLDEMVASFAGDAVLLAGNIAGAAQ
DGDLLMFRSEIHALRSCAANVGALAIQEACKSCRDVGPAELQTRGVELARRVSDEVVRLE
GAVAQSPNRYLRTPSAASELPT
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
ttggctgaggccggacaggctcagggctggactgccggccgggtggccgggcttcgcgcg
attgctcaaggtctgcaggcaaggctccgggagcggccggacctggaacacgagatgggc
ttcaaccggcttatcttctgcgcgctgatcgcgacctacctctggctcgttccgtccccc
gacatgtttacgggcctacaggcctgcgccgtctacttcgcgttcgcgctggtgctgatc
accgccatggtgctgcagccgcgcatctcgcacccgcgtcgcatcgtcgcgatgatcggt
gacctgaccgcgctcggcacggaaatgcatatcagcggcagcgccaatgccggcttctat
ccgctgtatctctggatcatcttcggcaacggcttccggttcgggctgggctacctgttc
ctgacgctgggcgtggcgctggcgagcttcggtgtcgtggtcgcgacgacgccctattgg
tccggcaagccgatgctgtccggcagcctgttgctggccctgctggtcctgcccgcttac
gcgagcggcctgatccgcaagctttcggaggccaagcgtatcgccgaggaagccaatcgc
gcaaagagccggttcctcgccaatgtcagccacgaactccgcacgccgctgaacgccatc
ctgggctcgacctcgttgctccggggtacgccgctcgaggcggagcagcgcgaactgacc
gatgccctcgatgtcgggacccgggcgctgctgtcgctgatcggcggcatcctcgacttc
tcccggatcgaggcgaaccggatgccgctgcggctggagccgttcgacctgccggacctg
ctggcggacatccgcgaactgctcggcccgcagacacgcctcaagaacctccggctgcgc
ttccatgtcacgcagcgcgtgccggaaatcatccggaccgaccgccgccatctccacgaa
gtgctgctgaacctggcaagcaatgccatcaagttcacctcggccggcgaggtcatgatc
tcggtcgatgccaggccgtgcggtccggagcgtctacgcttccgcttcgaggtatcggac
accggcatcggcatcaggcaggaagcgcgcgaacgcattttcgaaagcttcacccaggcc
gagccgaccatcatcgaccgcttcggcggcaccggcctcggcctcaccatcgcgcggcag
ctggtgacgctgatgggcggcacgatcggcgtcgagagcgttttcggcgaaagcagcacg
ttctggttcaccatcgagtgcgacgaggtcgttgccgcaaccacaccgaccgatcagatg
gcgattccaaacatccgggtggtgctgctctgcgacgatgcgctcatgggcggacgcatc
aagcggcaactggaagcactcggactggaggccgagcgcgcgtcggatgagccggacgcg
ctggcacggctggcacggaagccgaacgcgggcgtccgtctccgaaccctgcttctgctg
cagcgtgacagtctgcatccggcggctacgctcgacgaggagaccggccgtttcctcggt
tccgcggacgtgccgatcatcggcgtggcgacactcgcggagaccggcccgccggccgac
atcgcgatccggcgctatgtcggaacctggatctcgcagcgtcccgatccggccgaactt
cgcgccgccctccgcaaggtggccgccaggccggaacagcacgcggaaccggacagcgta
gctggatcgaatgcggttccgaaacgaagcctgcatgtgctggtagcagacgacaacgac
atcaatctccgtgtcgtcgcgaaagtgctggaacgcgcgggtcattcgatgcggctggtc
aggaacggcgtcgaagcgctcgacgcactggagcaggaacggttcgacattgtcctgatg
gacgtcaacatgccggtcatgaacgggatcgaggccacgaaactctatcgcttcgcgtcg
ctcggcgagccacgcgtaccgatcgtggcgctgacggcagatgcgacgcaggagacagag
cgcgactgtcttgaagcaggaatggatgcctgcctgaccaagccgatcgaggtgtttcgg
ctcgccgccgcactggagcgcatcgcgcatccggccgcccccccggcgtcttcgcaatcg
catcggtcatcatccgcggcgatgctgccgatcaggcaggtgccgcagcacccgattttc
gatgacgagatgctggataaccttcgcacactcggcggcgaggagttccttgacgaaatg
gtcgcaagcttcgccggcgatgcggtcctgctggcaggcaatatcgccggtgcggcgcag
gatggcgacctgctgatgtttcgcagcgagatccacgcgctgcgcagctgcgccgcgaac
gtcggcgcgctggcgatccaggaagcctgcaagtcgtgccgcgacgtcgggcctgcggaa
ctgcagacccgcggcgtcgagttggcacgacgcgtaagcgacgaggtcgttcgattggaa
ggggcggtggcgcagtccccaaatcggtacctgcgcacgccatccgcagcgagcgagctt
ccgacatga
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