Lichenicola cladoniae: HN018_17165
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Entry
HN018_17165 CDS
T07054
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
lck
Lichenicola cladoniae
Brite
KEGG Orthology (KO) [BR:
lck00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lck03032
]
HN018_17165 (topA)
03400 DNA repair and recombination proteins [BR:
lck03400
]
HN018_17165 (topA)
Enzymes [BR:
lck01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HN018_17165 (topA)
DNA replication proteins [BR:
lck03032
]
Prokaryotic type
DNA Topoisomerases
HN018_17165 (topA)
DNA repair and recombination proteins [BR:
lck03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HN018_17165 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
QKE91534
UniProt:
A0A6M8HSQ8
LinkDB
All DBs
Position
3784924..3787680
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AA seq
918 aa
AA seq
DB search
MTDVVVVESPAKAKTINKYLGDGFTVLASFGHVRDLPPKDGSVRPDENFAMDWEADERGN
RQIAAIAKALKGAKRLYLATDPDREGEAISWHVRAMLEERNLLRGVDVQRVTFNEITKGA
IKTAMGRPRELDMPLIEAYLARRALDYLVGFTLSPVLWRKLPGSRSAGRVQSVALRLICE
REAEIEIFKPREYWSILAQMTTPAGAPFNARLTHLDGKKLDQFDLNNQDKAFAARTAVEA
GQFSVTSVERRKVKRNPPAPFTTSTLQQEASRKLGMGAQATMRAAQQLYEGIELGGETTG
LITYMRTDGVQMAREAIDAIREHIGEQFGRDYLPGLAREYSTKAKNAQEAHEAVRPTDVN
RAPEEIGRYLSDEQRRLYELIWKRAVASQMQSAELDQVIVEIAEPTAKAKLRATGSIIAF
DGFLKLYTEGRDDDAKPGSEEEDSRMLPPMREQDTLKRGTVSADQHFTQPPPRFSEASLV
KKMEEIGIGRPSTYASILSVLRDRDYVRMENKRFVPEDRGRLVTAFLTSFFERYVDPHFT
AGLEEQLDDISDGRADWRDVMAKFWGAFSHAVAQTKDLKISDVIDALDADLSPHFFPVNA
DGSDPRLCKACGTGRLGLKLGRYGSFIGCSNYPNCQFTRRLVIDSKDGEGGETLKDGMRA
LGTHPATGEDVTVKRGPWGLYVQQGEPDPNDKKAKPKRTTLPKGFEGDTVTLEQAVGLLS
LPRLVGMHPEMGEPIEAGIGRFGPYVKMGAIFASLDKDDDILLVGMNRAMDVLGKKLASV
RALGEHPKDKEAVLVRKGRFGPYVQHGQMVANLPRERTMEDFTLEDALPLLAEKGKMLKP
KGKKGAKAKPVRKAAAKVTAKPDTVEAAEKPAAKRAAAAKPAAKAEAKTKASAKPAAKKK
PSAKIAASATAPVAKKRA
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacgtcgtcgtggtcgagtcgcctgccaaggcgaaaacgatcaacaagtatctg
ggcgacggcttcaccgtgctcgcctcgttcggtcacgtccgtgacctgccgcccaaggat
ggcagcgtccggccggacgagaacttcgcgatggactgggaagccgatgagcgcggcaac
cgccagatcgcggccatcgccaaggcgctgaagggcgccaagcgcctctatctcgccacc
gatccggatcgcgagggcgaggcgatcagctggcatgtccgcgcgatgctggaggagcgc
aacctgctccgcggcgtcgacgtgcagcgggtgacgttcaacgagatcaccaagggcgcc
atcaagaccgcgatgggccgtccgcgcgagctcgatatgccgctgatcgaggcctacctg
gcccggcgggcgctcgactacctggtcggcttcaccctgtcgccggtgctgtggcgcaag
ctgccgggcagccgcagcgcgggccgcgtgcagtcggtggcgctcaggctgatctgcgag
cgcgaagccgagatcgagatcttcaagccgcgcgagtactggtcgatcctggcgcagatg
accacgccggccggcgcgccgttcaatgcccgcctcacccacctggacggcaaaaaactc
gaccagttcgacctgaacaaccaggacaaggcattcgccgccaggacggcggtcgaggcc
gggcagttctcggtaacatcggtcgagcggcgcaaggtcaagcgcaacccgcctgccccg
ttcaccacctcgaccctgcagcaggaagccagccgcaagctcggcatgggcgcccaggcg
acgatgcgggcggcgcagcagctgtacgagggcatcgagctcggcggcgagaccaccggc
ctgatcacctacatgcggaccgacggcgtgcagatggcgcgggaagcgatcgacgccatc
cgcgagcatatcggcgagcagttcggccgcgactacctgcccggcctggcacgggaatat
tcgaccaaggccaagaacgcccaggaagcgcatgaggcggtgcggccgaccgacgtcaac
cgtgcgcccgaggagatcggccgctatctgtccgacgagcagcgccggctgtacgagctg
atctggaagcgcgccgtcgccagccagatgcagtcggccgagctcgaccaggtgatcgtc
gagatcgccgaaccgaccgcgaaagccaagctgcgtgccaccggctcgatcatcgccttc
gacggtttcctcaagctctacaccgagggccgcgacgacgacgcgaagcctggctcggaa
gaagaggacagccggatgctgccgccgatgcgcgagcaggacacgctgaagcgcggcacc
gtaagcgccgaccagcacttcacccagccgccgccgcgcttctccgaggccagtctggtc
aagaagatggaagagatcggcatcggccggccatcgacctacgcgtcgatcctgtccgtg
ctgcgcgatcgcgactatgtgcggatggagaacaagcgcttcgtgccggaggatcgcggc
cgtctcgtcaccgcgttcctgaccagcttcttcgagcgttatgtcgacccgcatttcacc
gcgggcctcgaggaacagctcgacgacatctccgacggccgggccgactggcgcgatgtg
atggccaagttctggggcgcgttctcgcacgccgtcgcccagaccaaggacctcaagatc
tcggacgtcatcgacgcgctcgatgccgatctgagcccgcatttcttcccggtgaacgcc
gatggcagcgatccgcgcctgtgcaaggcctgcggcaccggccggctcgggctgaagctc
ggccgctacggcagcttcatcggctgctcgaactatccgaactgccagttcacccgcagg
ctggtgatcgactccaaggacggcgagggcggcgagaccctcaaggatggcatgcgggcg
ctcggcacccatcccgccaccggcgaggacgtcaccgtcaagcgcgggccatggggcctc
tacgtgcagcagggcgagcccgacccgaacgataagaaggccaagcccaagcgcaccacc
ctgccgaaggggttcgagggcgacaccgtcaccctggagcaggcggtcggactgctgtcg
ctgccgaggctggtgggcatgcatcccgaaatgggtgagccgatcgaggcgggcatcggc
cggttcgggccgtatgtgaagatgggcgcgatctttgcctcgctcgacaaggatgacgac
atcctgctggtcggcatgaaccgggcgatggacgtgctgggcaagaagctggcctcggtg
cgcgcactcggcgagcatccgaaggacaaggaggcggtgctggtccgcaagggtcggttc
ggtccgtacgtccagcatgggcagatggtcgccaacctgccgcgcgaacgcaccatggag
gatttcaccctcgaggatgcgctgccgctgcttgccgagaagggcaagatgctaaagccc
aagggcaagaagggcgcgaaggccaagccggtgcgcaaggccgcggccaaggtgacggca
aagccggacacggtcgaggcggccgagaaaccggcggccaagcgcgcggcagctgcaaag
ccagccgccaaggccgaggccaagaccaaggcgagcgccaagccggcggcgaagaagaag
ccatccgcgaagatcgcagccagcgcgaccgccccggtcgccaagaagcgggcctga
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