Lichenicola cladoniae: HN018_17610
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Entry
HN018_17610 CDS
T07054
Name
(GenBank) TlyA family RNA methyltransferase
KO
K06442
23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:
2.1.1.226
2.1.1.227
]
Organism
lck
Lichenicola cladoniae
Brite
KEGG Orthology (KO) [BR:
lck00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lck03009
]
HN018_17610
Enzymes [BR:
lck01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.226 23S rRNA (cytidine1920-2'-O)-methyltransferase
HN018_17610
2.1.1.227 16S rRNA (cytidine1409-2'-O)-methyltransferase
HN018_17610
Ribosome biogenesis [BR:
lck03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
HN018_17610
23S rRNA modification factors
HN018_17610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FtsJ
S4
Methyltransf_12
Methyltransf_23
Methyltransf_25
Methyltransf_11
Motif
Other DBs
NCBI-ProteinID:
QKE91607
UniProt:
A0A6M8HTW1
LinkDB
All DBs
Position
3893375..3894109
Genome browser
AA seq
244 aa
AA seq
DB search
MKTRADQLLVDRGLVESRVRAQALILAGLVFTGEMRVAKAGDMLAEDAPLGVRGQEHPWV
SRGGLKLDHAITHFGLSPAERICLDIGASTGGFTDVLLTHGASRVHAVDVGHGQLAWKLR
SDPRVVVHEKVNARTLTADIVPDPIGVLVCDASFIGLRTVLPASLELCMPGAWAVALIKP
QFEAERGQVGAKGVVRDPAIHDQVCAMIRDWWAAWPGWTVIGIEPSPITGPEGNREFLIA
ARKS
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacgcgtgcggatcagctgctggtcgatcgcggactggtcgagagccgcgtacga
gcccaggcgctgatcctggccggactggtgttcaccggcgagatgcgcgtggccaaggcg
ggtgacatgctggcggaggatgcgccgctcggcgtgcgtgggcaggagcacccgtgggta
tcgcggggcgggctgaagctggaccatgcgatcacccatttcggcctgtcgccggccgag
cgcatatgtctcgatatcggtgcctcgaccggcggcttcaccgacgtcctgctgacgcat
ggcgcgagccgggtgcatgcggtggatgtcgggcacggtcagttggcatggaagctgcgc
agcgatccgcgggtggtcgtgcacgagaaggtcaacgcccggacgttgactgcggacatc
gtgccggacccgatcggggtgctggtgtgcgacgccagcttcatcggactgcggacggtc
ctgcccgcttcactcgaactctgtatgcccggagcctgggcggtcgcgttgatcaagccg
cagttcgaagctgaacgtgggcaggtcggcgcaaaaggcgtcgtgcgggacccggccatt
catgaccaagtctgcgcgatgatccgggactggtgggcggcctggccgggctggaccgtg
atcggcatcgagccgagcccgatcaccggtccggaaggaaaccgcgagttcctgatcgcc
gcccggaaatcctga
DBGET
integrated database retrieval system
