Lichenicola cladoniae: HN018_18175
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Entry
HN018_18175 CDS
T07054
Name
(GenBank) sugar ABC transporter ATP-binding protein
KO
K10562
rhamnose transport system ATP-binding protein [EC:7.5.2.-]
Organism
lck
Lichenicola cladoniae
Pathway
lck02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lck00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
HN018_18175
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lck02000
]
HN018_18175
Transporters [BR:
lck02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Rhamnose transporter
HN018_18175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
ABC_ATPase
AAA_16
AAA_29
AAA_23
RsgA_GTPase
AFG1_ATPase
MeaB
AAA_15
MukB
Motif
Other DBs
NCBI-ProteinID:
QKE91700
UniProt:
A0A6M8HTQ6
LinkDB
All DBs
Position
complement(4019329..4020825)
Genome browser
AA seq
498 aa
AA seq
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MDAILSLRDVAKSYGGVKALTSGTLDLYPGCVTVLLGENGAGKSTLVKIMTGIVRADSGT
ISLNGAPIAITSPDQARDLGISAIFQEAVLFDELSVAENIFITGRPTRARLPGIRTVDWA
VMNSRARTVLARLDPSIDPGVRLKRLSVAQRHLVQIARALSNEARIIIMDEPTAALSLCE
AEQLFAITRSLRDEGRAILFISHKFEEVFELCDRYAVFRDGAGVGQGELEGIGRDRLVNM
MVGRAIDQIFPKLDVPIGDEVLRVEALGRSLEFEDVSFSLRRGEILGVYGLIGAGRSEVM
EALFGLHPAHRGRIVLEGKPVRINSPQEAIGLGIALVPEDRQSQGAHLKLPIRDNITMPS
LQRFRTGPFLSRRKQRAESSVFATALGVKMSGLDQRVDELSGGNQQKVVIAKWLATQPRV
LILDEPTKGIDVGAKAQVHRLMGEMVAKGVSVIMVSSELPEILGMADRIMVMRRGRVRGV
LDRSQATASAIVGLATDA
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atggatgcgatcctcagcctgcgcgacgtcgccaaatcctatggcggcgtcaaggctttg
accagcggtacgctggatctctatcccggctgcgtgacggtgctcctgggcgagaacggt
gccggcaagtcgacgctggtcaagatcatgaccgggatcgtgcgggccgacagcggcacg
atcagcctcaatggtgcgccgatcgccatcacctctccggaccaggcacgcgatctcggg
atcagcgcgatcttccaggaggcagtgctgttcgacgagttgtcggtggcggaaaacatc
ttcatcaccgggcgtccgacacgggcccggctgccgggcatcaggacggtggactgggcg
gtgatgaacagccgggccaggaccgtgctggcgcgcctcgacccgtcgatcgatccgggc
gtcaggctgaagcgcctgtcggtagcgcagcgccatctggtgcagatcgcacgagcgctg
tcgaacgaggcgcgcatcatcatcatggacgaaccgaccgctgcgctgtcgctttgcgag
gcggagcagttgttcgcgatcacccgatcgctgcgtgacgaaggacgcgcgatcctgttc
atctcccacaagttcgaggaagtgttcgagttgtgcgaccgctatgcggtgtttcgcgac
ggtgcgggtgtcggccagggcgagctggaaggcatcggccgcgaccgcctggtcaacatg
atggtcgggcgcgcaatcgaccagatctttccaaagctggacgtgccgatcggcgacgag
gtgctgcgggtcgaggcgctcggccgctcgctcgaattcgaggatgtcagcttctcgctg
cgccgcggcgagatcctcggcgtgtacgggctgatcggcgccggtcgctccgaggtcatg
gaggccctgttcggtctccaccccgcccatcgcggccggatcgtgctcgaaggcaagccc
gtccggataaactccccgcaggaggcgatcgggctcggcatcgcactggtgccggaggac
cgtcagagccagggcgcgcacctgaaactgccgatccgcgacaacatcaccatgccgagc
ctgcaacgtttccggaccgggccgtttctcagccgccggaaacagcgggccgagagcagc
gtgtttgccacggcgctgggcgtgaagatgtccgggctcgaccagcgggtcgacgaactc
tccggcggcaaccagcagaaggtggtgatcgccaaatggctggcgacccagccccgcgta
ctgatcctggacgagccgaccaagggcatcgacgtcggcgccaaggcgcaggtccaccgg
ctgatgggcgagatggtcgccaagggcgtctcggtgatcatggtgtcgtccgagcttcct
gaaatcctcggcatggcggaccggatcatggtcatgcgccgcggccgggtgcgcggcgtg
ctggaccggagccaggcgaccgcctccgcgatcgtcggactggccaccgatgcctga
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